Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq186 116 4e-21 seq40 95.1 1e-14 seq27 93.3 5e-14 seq65 91.5 2e-13 seq21 89.7 6e-13 seq19 87.8 2e-12 seq4 87.8 2e-12 seq38 86.0 7e-12 >seq186 Length=1016186 Score = 116 bits (128), Expect = 4e-21 Identities = 223/325 (69%), Gaps = 4/325 (1%) Strand=Plus/Plus Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733 ||||||| || || || || |||||||| | ||| || || || || || | Sbjct 975741 TTACCGATGGCATCGATTTCGTCGATGAAAATGATGCAAGGGGCATTCTTCCGGGCGTTG 975800 Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG-- 11791 ||||||| ||||| ||||| | || ||||| ||||||||||| ||||| | | Sbjct 975801 GCGAAAAGATCACGAACACGGGAAGGACCGACACCAACGAACATCTCGACGAACTCGGAA 975860 Query 11792 CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 | || || | ||||| ||| || || || |||||||| | || ||||| | || Sbjct 975861 CCGCTGA-CGCTGAA-GAAAGGTACGCCGGATTCACCAGCAGTAGCCTTTGCGAGCAAAG 975918 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTC 11911 |||||||||||||||| | ||| | ||| | ||| || || |||||||| ||||| || Sbjct 975919 TCTTACCCGTACCAGGAGGACCTGAGAGGATGGCACCGCGAGGGATCTTTGCACCGAGTC 975978 Query 11912 CAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGG 11971 | | ||||| ||||||||||| |||| |||| | ||| |||| || Sbjct 975979 TCTGGAATTTTTCAGGGGTCTTGAGGAAGCTGACAAACTCCATGATTTCGACCTTTGCCT 976038 Query 11972 AGTCGATACCCTCAACATCGGTGAA 11996 ||| |||||| ||||||| | ||| Sbjct 976039 CGTCCATACCCGCAACATCAGAGAA 976063 >seq40 Length=974685 Score = 95.1 bits (104), Expect = 1e-14 Identities = 238/359 (66%), Gaps = 2/359 (1%) Strand=Plus/Minus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATA-C 109558 ||||| || |||||||| || ||||| |||||| || || ||||| | | ||| | Sbjct 724634 GTTCAGAGATTGAGACTGGTCAATGAAAGCACCACGGTCGGCGGCCATTTGCAGGATGGC 724575 Query 109559 ACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCA 109618 || | || | ||||||| || |||||||| | | ||| || || ||||||| | Sbjct 724574 ACGCTGGGAGA-TTTCCCACACGGTCTTGTAGAGAGCCTTAATGTCGGCGGGAATATTGG 724516 Query 109619 CGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGA 109678 ||||| |||| || |||||| || | || | | |||||| | | |||||| | Sbjct 724515 GAATGTTCTGAACGGAACCACCATCCGCGATGATACGGTTCTTCATGTTGTCCGACCACA 724456 Query 109679 GACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAA 109738 | || | | ||||| | | ||| | |||||| || || |||||||||| Sbjct 724455 GGCCAAGGTCGACAAGATCCTTGAGAAGCCACGGGTTGACGACCTGGAACTCACCAGCAA 724396 Query 109739 GTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGA 109798 | || || ||||||||| | ||||| || |||||||| || ||| ||| || | Sbjct 724395 GAACACGGCGAGAGTAGATGTTCGAGGTGTAAGGCTCGAAACATTCGTTGAAGCCCAGAA 724336 Query 109799 TTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTC 109857 | || ||| || |||||||| || |||| | | |||||| || | ||| ||| Sbjct 724335 TCTGGCTGGTGCTTGCAGTGGGCATTGGTGCCACCAACAAACTGTTGCGCACACCGTTC 724277 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 635764 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 635823 Query 136777 GGGAACAGCTTTT 136789 | || || |||| Sbjct 635824 GTGACCATTTTTT 635836 >seq27 Length=857455 Score = 93.3 bits (102), Expect = 5e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || || || || || || |||||||||||||| || ||| || || Sbjct 682650 GGCAAAGTCAGTGTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACC 682709 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 ||||| | ||| | ||||| ||||| ||||||| | |||| |||||| |||||||| Sbjct 682710 CGGCATCAATCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAGAAGAT 682769 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAG 119655 ||||||||| ||||| || | ||||||| || |||| Sbjct 682770 TCCCTCCACAGCAGCGAAGGCCACAAGACGCTGGGCGAAAG 682810 >seq65 Length=534987 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||| ||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 324921 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 324980 Query 136777 GGGAACAGCTTTT 136789 |||| || ||||| Sbjct 324981 GGGACCATCTTTT 324993 Score = 87.8 bits (96), Expect = 2e-12 Identities = 72/87 (83%), Gaps = 3/87 (3%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||| ||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 323711 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 323652 Query 136777 GGGAACAGCTTTTAGATATATTTTTTG 136803 |||| || ||| ||| ||||||| Sbjct 323651 GGGACCATTATTTGGAT---TTTTTTG 323628 >seq21 Length=293296 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||| ||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 148826 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 148885 Query 136777 GGGAACAGCTTTTAGAT 136793 |||| || ||||| || Sbjct 148886 GGGACCATTTTTTACAT 148902 >seq19 Length=523213 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 165502 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 165561 Query 136777 GGGAACAGCTTTT 136789 | || || |||| Sbjct 165562 GTGACCATTTTTT 165574 >seq4 Length=262797 Score = 87.8 bits (96), Expect = 2e-12 Identities = 73/87 (84%), Gaps = 3/87 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 132598 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 132657 Query 136777 GGGAACAGCTTTTAGATAT--ATTTTT 136801 | || || |||| ||| | |||||| Sbjct 132658 GTGACCA-TTTTTTGATCTTCATTTTT 132683 >seq38 Length=883156 Score = 86.0 bits (94), Expect = 7e-12 Identities = 166/245 (68%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 11725 CGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACG 11784 || || ||| | || || ||||| |||||||| || || || || || ||| |||| || Sbjct 367637 CGGGCTTGTGCAAACAGCTCACGAACACGCTTAGCGCCGACTCCGACATACACCTCATCG 367696 Query 11785 AAGTTTGCGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCG 11844 || | | | |||| | | |||||||||| || || ||||||| || || ||| Sbjct 367697 AATTCAGAGCCAGACATGTAGAAGAAGGGAACACCAGCTTCTCCAGCGACAGCACGGGCG 367756 Query 11845 AGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCA 11904 || | |||||| ||||||||||| | || | ||||| |||| || | ||| || Sbjct 367757 AGCAAAGTCTTTCCCGTACCAGGAGGTCCCACAAGAAGCACGCCCTTTGGCAATTTGCCA 367816 Query 11905 CCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCC 11964 ||| | || | ||||| || ||| | ||| || || | |||| || || ||| Sbjct 367817 CCAAGAGAAGAGAATCGCTCCGGATTCAACAAGAATTCAACGAGTTCCTGGAGCTCTTCC 367876 Query 11965 TTGGC 11969 ||||| Sbjct 367877 TTGGC 367881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588968424296200