Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq38 143 6e-29 seq40 107 4e-18 seq160 95.1 3e-14 seq65 86.0 1e-11 >seq38 Length=883156 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| |||||| ||| || ||||| |||||||||| || || ||||||||||| Sbjct 700944 ACCAGGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCGGAGAGGGTCCTCCCATCTTCC 701003 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | ||||||||| |||||||| || || || |||||||| ||||| || || |||||||| Sbjct 701004 AACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCTTGG 701063 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || || || || || || || || || |||| |||||| Sbjct 701064 ATCTTGCTCTTCACGTTGTCGATTGTATCAGAGGACTCAACCTCCAGTGTAATGGTCTTT 701123 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 701124 CCGGTGAGTGTCTTGACGAAGATCTGCAT 701152 Score = 127 bits (140), Expect = 5e-24 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||||||||| || || |||||||| ||||| |||| | ||| | || || || Sbjct 701400 ACGAGGTGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGACAAAGTGCGGCCGTCCTCC 701459 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| ||||| || || || || ||||| ||||| ||||| || || || ||| Sbjct 701460 AGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGA 701519 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCT 195109 || || |||||| || ||||| |||| | | || || || || | ||| | |||| Sbjct 701520 ATCTTCGACTTGACATTGTCAATAGTGTCGCTGGAC--TCGACCTCCAAGGTGATGGTCT 701577 Query 195110 TTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || | ||| || ||||| | |||||| Sbjct 701578 TGCCCGTGAGAGTCTTGACGAAGATTTGCAT 701608 >seq40 Length=974685 Score = 107 bits (118), Expect = 4e-18 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 160574 AGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAA 160633 |||||| | || | |||||||| | ||||| | ||||| ||||||||| |||| | Sbjct 723420 AGAGCCCGTGATCTGTTCTACGCTCTGTGGACCCCTGATCTGTTCATGAAGCGAGTTGAG 723479 Query 160634 GACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTAT 160693 ||| || || |||| || ||||||||||||||||| ||||| || | |||||||||| Sbjct 723480 TCCAACGGCGACTGGACTCTGTTCTGTCCCAATGAAGCCCCTGGCCTGGCTGATGTTTAT 723539 Query 160694 GGTTCCGAGTTCGAGACTCTTTATGAA 160720 || |||||| || | ||||||||| Sbjct 723540 GGCGACGAGTTTGATGCCCTTTATGAA 723566 >seq160 Length=150305 Score = 95.1 bits (104), Expect = 3e-14 Identities = 131/182 (72%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| ||| || || | ||||| || ||||||||||| |||||||| Sbjct 102198 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 102139 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || ||||| || || || || || ||||| || || || |||||| || || Sbjct 102138 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 102079 Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 |||||||| ||| || || || ||||||| ||||| || |||| || || ||| Sbjct 102078 ATGGTGTCGCTCGA---CTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 102022 Query 195130 AA 195131 || Sbjct 102021 AA 102020 >seq65 Length=534987 Score = 86.0 bits (94), Expect = 1e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| || | ||| || | || || ||| Sbjct 174140 ACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTACGGCCGTCCTCG 174199 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 |||||||| || |||||||| || || || ||||| || ||||| || || |||||| Sbjct 174200 AGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCT 174256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109466972525243