Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq27 84.2 2e-11 >seq27 Length=857455 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020 || ||||| ||| || ||||||||||| | | || | || || || || || | | Sbjct 682648 CAGGCAAAGTCAGTGTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGA 682707 Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAAT 19080 || ||||||| ||| | || || | |||||| || |||||||| |||||||| ||||| Sbjct 682708 CCCGGCATCAATCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAGAAG 682767 Query 19081 ATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA 19140 || || || || || || || || || || | | | || ||| || |||| | Sbjct 682768 ATTCCCTCCACAGCAGCGAAGGCCACAAGACGCTGGGCGAAAGTAGATTCCTTATCCGAA 682827 Query 19141 ATCCATTTCAGTGCCCAATCAGCCTTCTT 19169 ||||| ||| ||||| | |||||||| Sbjct 682828 ATCCAGGTCATGGCCCACTGGGCCTTCTT 682856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562101569875560