Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq38 102 7e-16
seq142 86.0 5e-11
>seq38
Length=883156
Score = 102 bits (112), Expect = 7e-16
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
|||||||| |||||||| || || ||| || ||| |||||||||| | || |
Sbjct 701163 AGACGGAGGACAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAGACAAGGTACGA 701222
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
|||||||||||| ||||| ||||| || || | || ||||| |||||||| || ||
Sbjct 701223 CCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAGGAATACCCTCC 701282
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435
||||| ||||| || || || || || || || | || | | ||| | ||
Sbjct 701283 TTATCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCTG-AAGACTCGACTTCTAATGT 701341
Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
| ||| || || |||||||| || |||||||||||||||
Sbjct 701342 GATAGTCTTTCCGGTAAGAGTCTTCACGAAAATTTGCATA 701381
>seq142
Length=918545
Score = 86.0 bits (94), Expect = 5e-11
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 390856 TTTCTTACGGTACCATCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTT 390915
||||| || ||||||||||||| || | | ||||| || ||||| | ||||
Sbjct 199920 TTTCTCACAGTACCATCATACTTAACCATGACCTCTTCCAAGGCCTTAACCAGCTTTCGC 199861
Query 390916 TGGATATAACCAGTGTCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCC 390975
|| ||||||||||| || ||||| || | ||||||| || | |||||||| || |||
Sbjct 199860 TGAATATAACCAGTTTCGGCAGTCTTGACAGCAGTATCGATCAGACCTTCTCGACCGGCC 199801
Query 390976 ATAACTTGGAAGAAAAATTC 390995
|| | |||||||| |||||
Sbjct 199800 ATGGCATGGAAGAAGAATTC 199781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029241581839210
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |