Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq38 132 3e-25 >seq38 Length=883156 Score = 132 bits (146), Expect = 3e-25 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| |||||||| ||||| ||| || || || ||||||| | || Sbjct 701159 ACGCAGACGGAGGACAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAGACAAGGT 701218 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||||||||||||||||||||| || ||||| |||||||| |||||||| || Sbjct 701219 ACGACCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAGGAATACC 701278 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||| || |||||||| |||||| || || || || | | | | ||| | Sbjct 701279 CTCCTTATCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCGA-CTTCTA 701337 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || ||||| |||||||| ||||||||||| Sbjct 701338 ATGTGATAGTCTTTCCGGTAAGAGTCTTCACGAAAATTTG 701377 Score = 91.5 bits (100), Expect = 1e-12 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || ||||| || || || || || || || || || || || ||||| | || || Sbjct 700932 CGCAGACGCAGCACCAGGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCGGAGAGGGTC 700991 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 || |||||| | ||||| ||||| || || ||||| || || || || |||||||| Sbjct 700992 CTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATTCCC 701051 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 ||||||||||| ||||| || || || || ||||||| | | || || Sbjct 701052 TCCTTGTCTTGGATCTTGCTCTTCACGTTGTCGATTGTATCAGAGGACTCAACCTCCAGT 701111 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || |||||||| ||||| ||||| || || Sbjct 701112 GTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTG 701149 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || || ||||| || ||| || || || || || | | ||| Sbjct 701387 ACGCAGACGAAGGACGAGGTGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGACAAAGT 701446 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | || || || ||||| ||||| ||||| || || || || |||||||| || || Sbjct 701447 GCGGCCGTCCTCCAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGGATGCC 701506 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTG-TGAAGTTTCAA 480729 ||||| || |||||||| |||||| |||||||| || || | | | ||| Sbjct 701507 CTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCCAA 701566 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || | || || || || ||||||||||| ||||| ||||| Sbjct 701567 GG-TGATGGTCTTGCCCGTGAGAGTCTTGACGAAGATTTG 701605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268135061197292