Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq40 134 4e-26
seq142 111 5e-19
seq76 100 8e-16
seq141 87.8 5e-12
>seq40
Length=974685
Score = 134 bits (148), Expect = 4e-26
Identities = 387/592 (65%), Gaps = 5/592 (1%)
Strand=Plus/Minus
Query 155910 ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC 155969
|| |||| ||| || | |||| | ||| | ||| ||||| || || | || | ||||
Sbjct 723475 ACTCGCTTCATGAACAGATCAGGGGTCCACAGAGCGTAGAACAGATCACGGGC-TCTGAC 723417
Query 155970 T-CCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028
| |||| | ||||||||||| || || || ||||| || | ||| | || ||
Sbjct 723416 TTCCTCCTTACCGTGATTCTTGCGAAGATCCAAGAACTCAAAGACATCGGCGTGCCAAGG 723357
Query 156029 CTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGC 156085
||| || || ||||| ||| ||| | |||| || ||||| || ||||| | ||
Sbjct 723356 CTCGAGGTAAATAGCGAAAGCGCCAGGGCGCTTGTTTCCTCCCTGGTCGACATATCTGGC 723297
Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145
||| || ||||| || | ||||| |||| |||||| || |||| || ||||| || |
Sbjct 723296 AGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAAGAACCGTTGGTGCCACC 723237
Query 156146 AATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTT 156205
||| | || || | | || | |||| | || || |||||||| | ||
Sbjct 723236 AATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGACCGATACCACCGGCGGTCTT 723177
Query 156206 AGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265
|| || || || ||| | ||| | | | ||||||||||| ||| || | |||
Sbjct 723176 CGAGATCATGGCACAAGTCTTGAGAGTGTCGTAGATACCTTCAATGCTATCCTCCTTCAT 723117
Query 156266 TGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGG 156325
| || |||| || | || || | || || ||||| ||||| ||||||||
Sbjct 723116 ATCGACGAGGAAGCAAGACGCCAGCTGGGGCTGGGGAGTCCCAGCATTGAACAGTGTAGG 723057
Query 156326 TGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG 156385
| |||||| | || || || | ||||| || ||| ||||| | ||| ||||
Sbjct 723056 AGACGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGTCTCAATGGCCTTTTCAAT 722997
Query 156386 ATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAAT 156445
|| |||||||||| || | || | |||| ||| ||||| |||||||| |||
Sbjct 722996 GTTGTTACCGTGAATACCGACGGCAACACGCATCAACAAGTGCTGGGGACGCTCAGCAAC 722937
Query 156446 CACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAA 156497
| || | |||||||| ||||| | || || || || || || ||||||
Sbjct 722936 CTTGCCGTTGATTCGCAGCAGGTAGGAACGCTCAAGTGTCTTGAAGCCGAAA 722885
>seq142
Length=918545
Score = 111 bits (122), Expect = 5e-19
Identities = 109/140 (78%), Gaps = 3/140 (2%)
Strand=Plus/Minus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| ||||||||| |||| ||||| ||| |||| |||||||||
Sbjct 200661 AGAATTTCCTTGAGACGAGGAACACCAAGGGTGACGTT---CTTCGACGAGACACCAGCA 200605
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
||||||||||| |||| || | || |||| |||||||||||| || || |||| |
Sbjct 200604 AAGTGGAAAGTGTTCAAGGTCATCTGTGTAGCGGGCTCACCAATAGACTGAGCGGCAAGC 200545
Query 301933 ATACCAACCATTTCTCCTGG 301952
| ||||||||||| |||||
Sbjct 200544 ACGCCAACCATTTCACCTGG 200525
>seq76
Length=447165
Score = 100 bits (110), Expect = 8e-16
Identities = 125/169 (74%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
|| || ||||| | || || | ||||| | | | | || || ||||| |||| ||
Sbjct 208810 ATGAGTCCACAGTCATCGCAGATGTGGACACGGAACGGGTCGGAGACGTCAAATAGACGC 208869
Query 251467 CCCTTGGTGAAGCGAGATG-CACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAA 251525
|||| |||| | | || ||||||| | ||||||||||||||| ||||| || |||||
Sbjct 208870 TCCTTAAGGAAG-GCGCTGGCACCGTGCGCAATCATACAATCACGTTCCATCTCTCCGAA 208928
Query 251526 ACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGA 251574
||| ||||||||||| || || ||||| || ||||||| || || |||
Sbjct 208929 ACGCAGACCACCATCACGGGCTCTACCTTCCACAGGCTGCCGGGTCAGA 208977
>seq141
Length=51265
Score = 87.8 bits (96), Expect = 5e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 302573 CTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTG 302632
||||||||| |||||| | || |||||| | ||| |||| | |||| ||||| || || |
Sbjct 40516 CTTCCATACCCTTGATCAGACAACGCTGCAGATATCCAGATCTAGAAGTTTTGACGGCAG 40457
Query 302633 TATCAATTAGACCAACACGACCACCCATAGCATGGAAG 302670
|||| || ||||| | ||||| ||||||||||||||
Sbjct 40456 TATCGATAAGACCTTCTCGACCGGCCATAGCATGGAAG 40419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471798195464773
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |