Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq40 134 4e-26 seq142 111 5e-19 seq76 100 8e-16 seq141 87.8 5e-12 >seq40 Length=974685 Score = 134 bits (148), Expect = 4e-26 Identities = 387/592 (65%), Gaps = 5/592 (1%) Strand=Plus/Minus Query 155910 ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC 155969 || |||| ||| || | |||| | ||| | ||| ||||| || || | || | |||| Sbjct 723475 ACTCGCTTCATGAACAGATCAGGGGTCCACAGAGCGTAGAACAGATCACGGGC-TCTGAC 723417 Query 155970 T-CCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028 | |||| | ||||||||||| || || || ||||| || | ||| | || || Sbjct 723416 TTCCTCCTTACCGTGATTCTTGCGAAGATCCAAGAACTCAAAGACATCGGCGTGCCAAGG 723357 Query 156029 CTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGC 156085 ||| || || ||||| ||| ||| | |||| || ||||| || ||||| | || Sbjct 723356 CTCGAGGTAAATAGCGAAAGCGCCAGGGCGCTTGTTTCCTCCCTGGTCGACATATCTGGC 723297 Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145 ||| || ||||| || | ||||| |||| |||||| || |||| || ||||| || | Sbjct 723296 AGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAAGAACCGTTGGTGCCACC 723237 Query 156146 AATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTT 156205 ||| | || || | | || | |||| | || || |||||||| | || Sbjct 723236 AATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGACCGATACCACCGGCGGTCTT 723177 Query 156206 AGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 || || || || ||| | ||| | | | ||||||||||| ||| || | ||| Sbjct 723176 CGAGATCATGGCACAAGTCTTGAGAGTGTCGTAGATACCTTCAATGCTATCCTCCTTCAT 723117 Query 156266 TGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGG 156325 | || |||| || | || || | || || ||||| ||||| |||||||| Sbjct 723116 ATCGACGAGGAAGCAAGACGCCAGCTGGGGCTGGGGAGTCCCAGCATTGAACAGTGTAGG 723057 Query 156326 TGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG 156385 | |||||| | || || || | ||||| || ||| ||||| | ||| |||| Sbjct 723056 AGACGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGTCTCAATGGCCTTTTCAAT 722997 Query 156386 ATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAAT 156445 || |||||||||| || | || | |||| ||| ||||| |||||||| ||| Sbjct 722996 GTTGTTACCGTGAATACCGACGGCAACACGCATCAACAAGTGCTGGGGACGCTCAGCAAC 722937 Query 156446 CACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAA 156497 | || | |||||||| ||||| | || || || || || || |||||| Sbjct 722936 CTTGCCGTTGATTCGCAGCAGGTAGGAACGCTCAAGTGTCTTGAAGCCGAAA 722885 >seq142 Length=918545 Score = 111 bits (122), Expect = 5e-19 Identities = 109/140 (78%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| ||||||||| |||| ||||| ||| |||| ||||||||| Sbjct 200661 AGAATTTCCTTGAGACGAGGAACACCAAGGGTGACGTT---CTTCGACGAGACACCAGCA 200605 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 ||||||||||| |||| || | || |||| |||||||||||| || || |||| | Sbjct 200604 AAGTGGAAAGTGTTCAAGGTCATCTGTGTAGCGGGCTCACCAATAGACTGAGCGGCAAGC 200545 Query 301933 ATACCAACCATTTCTCCTGG 301952 | ||||||||||| ||||| Sbjct 200544 ACGCCAACCATTTCACCTGG 200525 >seq76 Length=447165 Score = 100 bits (110), Expect = 8e-16 Identities = 125/169 (74%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| | || || | ||||| | | | | || || ||||| |||| || Sbjct 208810 ATGAGTCCACAGTCATCGCAGATGTGGACACGGAACGGGTCGGAGACGTCAAATAGACGC 208869 Query 251467 CCCTTGGTGAAGCGAGATG-CACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAA 251525 |||| |||| | | || ||||||| | ||||||||||||||| ||||| || ||||| Sbjct 208870 TCCTTAAGGAAG-GCGCTGGCACCGTGCGCAATCATACAATCACGTTCCATCTCTCCGAA 208928 Query 251526 ACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGA 251574 ||| ||||||||||| || || ||||| || ||||||| || || ||| Sbjct 208929 ACGCAGACCACCATCACGGGCTCTACCTTCCACAGGCTGCCGGGTCAGA 208977 >seq141 Length=51265 Score = 87.8 bits (96), Expect = 5e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 302573 CTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTG 302632 ||||||||| |||||| | || |||||| | ||| |||| | |||| ||||| || || | Sbjct 40516 CTTCCATACCCTTGATCAGACAACGCTGCAGATATCCAGATCTAGAAGTTTTGACGGCAG 40457 Query 302633 TATCAATTAGACCAACACGACCACCCATAGCATGGAAG 302670 |||| || ||||| | ||||| |||||||||||||| Sbjct 40456 TATCGATAAGACCTTCTCGACCGGCCATAGCATGGAAG 40419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471798195464773