Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq156 131 2e-24 seq23 113 6e-19 seq40 109 7e-18 seq27 107 2e-17 seq186 87.8 2e-11 >seq156 Length=371902 Score = 131 bits (144), Expect = 2e-24 Identities = 125/158 (79%), Gaps = 3/158 (2%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||||||||| || || ||||| ||||||||||| | ||||| |||||| Sbjct 204052 GACAGCATCGGCGGCACCGTCACCTGCGTTATCCGCAACGTGCCCGTCGGCCTGGGCGAG 204111 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| | |||||| ||| || || |||||||| ||||| |||||| Sbjct 204112 CCCTGCTTCGACAAGCTTGAGGCCAAGCTGGCGCATGCCATGCTCAGCATCCCCGCCACC 204171 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTTT--GCGGGTGCG 19202 ||||| |||||||| ||| |||| || |||| |||| Sbjct 204172 AAGGGCTTCGAGATCGGC-TCGGGCTTCGGCGGCTGCG 204208 >seq23 Length=831652 Score = 113 bits (124), Expect = 6e-19 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || |||||||||||||| ||||| |||| | ||| | || |||||| |||| || ||| Sbjct 185903 GCTGCCAACTACCTCGATATCAAAGCTCTCTTGGATGTCGGCTGCAAGACTGTTGCGAAC 185962 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||| ||||||||||| ||||| ||||| |||||||| || |||||| || ||| Sbjct 185963 ATGATTAAGGGCAAGTCCCCCGAAGAGATTCGCAAGACTTTCAACATCCAGAACG 186017 >seq40 Length=974685 Score = 109 bits (120), Expect = 7e-18 Identities = 204/300 (68%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||| || | || |||| ||| || ||||| |||||||| || | ||||| || Sbjct 723314 CTGGTCGACATATCTGGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGA 723255 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||||||||| | | ||||| ||| | ||| || | ||| || || || Sbjct 723254 AGAACCGTTGGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGACC 723195 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| || ||||| | ||| ||||| | || || ||||| ||||||||||| || || Sbjct 723194 GATACCACCGGCGGTCTTCGAGATCATGGCACAAGTCTTGAGAGTGTCGTAGATACCTTC 723135 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || || ||||||| || ||||| ||||| |||| || || || | || || Sbjct 723134 AATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCCAGCTGGGGCTGGGGAGTCCC 723075 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 || ||||| || || || | ||| ||||| | | | | |||||| | |||||| Sbjct 723074 AGCATTGAACAGTGTAGGAGACGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGT 723015 >seq27 Length=857455 Score = 107 bits (118), Expect = 2e-17 Identities = 169/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| ||| || ||||||||||| || | || ||||| Sbjct 682354 GCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTTCCTGCAAGAGAGATA 682413 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||| || | ||||||| ||| | | |||||| | | Sbjct 682414 CTCTCCATGAAGTCGAAGGGGTTTGGAGAGTTGTAGTACTTCTTGTTTCCGAGGGCGACC 682473 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 | ||| ||||| || || ||||| |||||||||||||| || | ||||||||| | | Sbjct 682474 AACAGCCGGTCAGCAACGAACTCAATGTACTGGCACATCAGCTTAGAGTTCATGCCCAGG 682533 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || | || || || | || ||| ||||| | ||||| | || ||||| |||||| Sbjct 682534 AGGCCGACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCGATGGCCACAGCCTCAACGATG 682593 Query 868931 AT 868932 || Sbjct 682594 AT 682595 Score = 95.1 bits (104), Expect = 1e-13 Identities = 174/253 (69%), Gaps = 3/253 (1%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 |||| || |||||||| || ||||||||||||||| ||| || |||| | ||| | Sbjct 682999 CCGAATGAATGTTCTCAATCATGATCTGGAAGCCGTAGAAGCACCGAGCCTCAGGCACCT 683058 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | ||||| || |||| || | ||||||||| ||||| ||||| ||| |||| Sbjct 683059 GCACCTCATTGCTGAAACGCTCCAGCAGGTTCTCATTGACGATTCCGTCAGAGGCAGCGA 683118 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGT 869807 | || || ||||| || ||| |||| ||||| ||||| | | ||| ||||| Sbjct 683119 AGAAGGCAAGGACATGAGAGATGAAGTAACGCTCATCGTCATTTAGGCGGTTGTTCCAGT 683178 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | || ||| || | ||||||||||||||||| || || ||||| || | Sbjct 683179 CGTGCAGATCTTTAGAGAGATCAATCTCCTCGGCGGTCCAGAAGGAAGCTTCGGCTTTCT 683238 Query 869868 TGTACATCTCCCA 869880 ||||||| | ||| Sbjct 683239 TGTACATTTGCCA 683251 >seq186 Length=1016186 Score = 87.8 bits (96), Expect = 2e-11 Identities = 153/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 1547265 GTGGGCGCGGTAGATGAACCGCGTCACGATGCCAAAGTTGCCGCCGCCGGCGCCGCGCAG 1547324 |||||| ||||| |||| | |||||||||||||||||| | ||||||||||| || Sbjct 387230 GTGGGCCTGGTAGGTGAAGCTCGTCACGATGCCAAAGTT---GTACCCGGCGCCGCGGAG 387286 Query 1547325 CGCCCAAAAGAGGTCGGCGTTGGGGCCGTCGGCGTCAGCGCGCACGAGGC-GCCCATCGG 1547383 |||| |||||||||||||| ||||| ||| || ||| || | | || || Sbjct 387287 GCCCCAGAAGAGGTCGGCGTT--TTCCGTC-GCGGACGCCGTCAC-AGTCTGTCCGCTGG 387342 Query 1547384 CGAGAACGACCTCGGCTGCCACGAGATTGTCGCACGTGAGACCCCAACGGCGCATCAGGA 1547443 | || |||||| || | || ||||||||| ||||| || | ||| | || Sbjct 387343 CCAGGACGACCGTTGCAGACAGCAGATTGTCGATGGTGAGGCCGTACTGGCCGCTGAGCC 387402 Query 1547444 AGCCGACGCCGCCGCCCTGCGTAAGGCCGGCAATGCC 1547480 |||| ||||||||| | ||||||||| ||| ||| Sbjct 387403 AGCCATATCCGCCGCCCAGGGTAAGGCCGCCAACGCC 387439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107054755441193