Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq38 107 1e-18 >seq38 Length=883156 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || || | ||| || |||||||| ||||||||||| ||||| | Sbjct 701154 CCACCACGCAGACGGAGGACAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAGAC 701213 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| ||| || ||||| || |||||| | || | | || ||||| || ||| Sbjct 701214 AAGGTACGACCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAGGA 701273 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||| || || || ||| || | |||||| | || | ||||| ||| || || Sbjct 701274 ATACCCTCCTTATCCTG-AATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCGAC 701332 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | || ||||| || || || | || || || || || ||||| Sbjct 701333 TTCTAATGTGATAGTCTTTCCGGTAAGAGTCTTCACGAAAATTTGCAT 701380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385214368990089