Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq38 125 7e-24 seq160 107 2e-18 seq27 107 2e-18 >seq38 Length=883156 Score = 125 bits (138), Expect = 7e-24 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || || || || || || ||||| ||| || ||| |||||| |||||||| || Sbjct 701412 GTCGATTCCTTTTGAATGTTGTAGTCGGACAAAGTGCGGCCGTCCTCCAGCTGCTTACCA 701471 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| || ||||||||||| ||||||||||| ||||| || ||||| |||| Sbjct 701472 GCGAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTCGACTTG 701531 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| |||||| ||| ||| || || | ||||| ||| ||||| || ||||| Sbjct 701532 ACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTC 701591 Query 133644 TTTACGAAAATCTGCATGG 133662 || ||||| || ||||||| Sbjct 701592 TTGACGAAGATTTGCATGG 701610 >seq160 Length=150305 Score = 107 bits (118), Expect = 2e-18 Identities = 134/181 (74%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| |||| || ||| | | | ||||| |||||||| || ||| | || Sbjct 102198 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCAAGCTGCTTACCAGCGAAGAT 102140 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || ||||||||||| || ||||| || |||||||| |||||| ||||| | || Sbjct 102139 CAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTC 102080 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||| | | ||| ||||||| ||| | ||| || || ||||| || || ||||| Sbjct 102079 GATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 102020 Query 133652 A 133652 | Sbjct 102019 A 102019 >seq27 Length=857455 Score = 107 bits (118), Expect = 2e-18 Identities = 332/510 (65%), Gaps = 19/510 (4%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || || || |||||||| ||||| || || || | | || || | | Sbjct 682359 CTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTTCCTGCAAGAGAGATACTCTC 682418 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| ||||| | ||| |||| ||| | || | || | ||| Sbjct 682419 CATGAAGTCGAAGGGGTTTGGAGAGTTGTAGTACTTCTTGTTTCCGAGGGCGACCAACAG 682478 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 ||||| || || ||||||||||||| |||||| || | |||||||||||| | | Sbjct 682479 CCGGTCAGCAACGAACTCAATGTACTGGCACATCAGCTTAGAGTTCATGCCCAGGAGGCC 682538 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || || | || || || ||||||| || ||| |||| ||||| ||| Sbjct 682539 GACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCGATGGCCACAGCCTC----AAC----- 682589 Query 120591 GAGCATAGTGTGGCCGGGCATCTTGT--GTTCGATGCGC---GTTCGGTAGTACAG---G 120642 || ||| | | | |||||| | ||||| || || || |||| | Sbjct 682590 GATGATATCCTCAACAACCTTCTTGTCGGGGCGATGGTTTAAGTGCG--AGAACAGAAGG 682647 Query 120643 CACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGG 120702 || |||||||| |||||||| |||||||| || || || ||||||||| || || || Sbjct 682648 CAGGCAAAGTCAGTGTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGA 682707 Query 120703 CCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAAC 120762 || ||||| | || | |||| | |||| |||| ||||| || || ||||| Sbjct 682708 CCCGGCATCAATCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAGAAG 682767 Query 120763 ACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCG 120822 | |||||||| || ||||| || | |||| ||| || || | ||| Sbjct 682768 ATTCCCTCCACAGCAGCGAAGGCCACAAGACGCTGGGCGAAAGTAGATTCCTTATCCGAA 682827 Query 120823 ATCCACTTCATGGCCCACTCGGCCTTTTTG 120852 ||||| |||||||||||| |||||| ||| Sbjct 682828 ATCCAGGTCATGGCCCACTGGGCCTTCTTG 682857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483414581999960