Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq27 105 6e-18 seq38 84.2 2e-11 >seq27 Length=857455 Score = 105 bits (116), Expect = 6e-18 Identities = 331/511 (65%), Gaps = 29/511 (6%) Strand=Plus/Minus Query 46772 CAAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCCACGCTGGCCGAGCG 46831 ||| ||||||||||||||||||| ||||| | || | || | ||| |||| Sbjct 682857 CAAGAAGGCCCAGTGGGCCATGACCTGGATTTCGGATAAGGAATCTACTTTCGCCCAGCG 682798 Query 46832 CATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATTTT 46891 | ||||| ||||| || || || | || || || || |||||| |||| || Sbjct 682797 TCTTGTGGCCTTCGCTGCTGTGGAGGGAATCTTCTTCTCTGGATCTTTTGCTTCCATCTT 682738 Query 46892 TTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCG 46951 | | || | || | |||||||| || || ||| |||||| | ||||| || Sbjct 682737 CTGGCTGAAGAAGCGTGGATTGATGCCGGGTCTCACTTTCTCCAACGAGCTCATCTCTCG 682678 Query 46952 CGACGAAGGACTACACACGGACTTTGCGTGTCT-CTATTACAAGACGCGCGTGAATGAGA 47010 ||||| ||||| ||||| |||||||| || || || || | ||| Sbjct 682677 TGACGAGGGACTGCACACTGACTTTGCCTGCCTTCTGTT------CTCGC---------- 682634 Query 47011 AATTAAAC--TCG----GACACGA----TCCTGAGCATGTTTAGG--GAGGCGGTGAGCA 47058 | |||||| ||| |||| || | |||| || | | ||||| ||| || Sbjct 682633 ACTTAAACCATCGCCCCGACAAGAAGGTTGTTGAGGATATCATCGTTGAGGCTGTGGCCA 682574 Query 47059 TCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGT 47118 ||||| ||||||| || || | || || || |||| | | |||||||||||| | || Sbjct 682573 TCGAACAGGAGTTCTTGACAGACGCTCTTCCTGTCGGCCTCCTGGGCATGAACTCTAAGC 682514 Query 47119 CTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGA 47178 |||||| | || |||||||| || || || || |||||||| |||||| | || Sbjct 682513 TGATGTGCCAGTACATTGAGTTCGTTGCTGACCGGCTGTTGGTCGCCCTCGGAAACAAGA 682454 Query 47179 AATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAA 47238 | || | || ||| || || || || || ||| | | || || || | || || | Sbjct 682453 AGTACTACAACTCTCCAAACCCCTTCGACTTCATGGAGAGTATCTCTCTTGCAGGAAAGA 682394 Query 47239 CCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 |||| || || ||||| || || || || || Sbjct 682393 CCAACTTCTTTGAGAAGCGTGTTGGTGACTA 682363 >seq38 Length=883156 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || |||||||||||||| || || |||||| |||||| || || || || | | Sbjct 701187 GATTCCTTTTGAATGTTGTAATCAGACAAGGTACGACCATCTTCAAGTTGCTTTCCAGCA 701246 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||||||||| ||||| || || || ||||| ||| || || | Sbjct 701247 AAGATGAGACGCTGTTGATCGGGAGGAATACCCTCCTTATCCTGAATCTTGCTCTTGACA 701306 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | | ||| ||||| | || | || || || || ||||| || Sbjct 701307 TTGTCGATGGTGTCTGAAGACTCGACTTCTAATGTGATAGTCTTTCCGGTAAGAGTCTTC 701366 Query 132110 ATGAAAATCTGCAT 132123 | |||||| ||||| Sbjct 701367 ACGAAAATTTGCAT 701380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476605069588440