Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq40 131 2e-24
seq27 87.8 3e-11
>seq40
Length=974685
Score = 131 bits (144), Expect = 2e-24
Identities = 211/301 (70%), Gaps = 2/301 (1%)
Strand=Plus/Plus
Query 259883 ACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGC 259941
|||||| | |||||| ||| | | ||||| ||| ||| | || || || || |||||
Sbjct 723015 ACCTACCATCTCATGTCCCAGAAATACTTCAC-TCATGCGTCTCCTACACTGTTCAATGC 723073
Query 259942 CGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGAT 260001
|| || || | || ||| |||| ||||| || | || ||||||| ||| ||
Sbjct 723074 TGGGACTCCCCAGCCCCAGCTGGCGTCTTGCTTCCTCGTCGATATGAAGGAGGATAGCAT 723133
Query 260002 CGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCAT 260061
|| || ||||| ||||| |||||| || || | ||||| ||| | ||||| || ||
Sbjct 723134 TGAAGGTATCTACGACACTCTCAAGACTTGTGCCATGATCTCGAAGACCGCCGGTGGTAT 723193
Query 260062 CGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCA 260121
|||| || || ||| | || ||| | ||| ||||| | | |||||||||||
Sbjct 723194 CGGTCTTAACGTTCACCGCATCCGTGCCACAGGCTCCTACATTGGTGGCACCAACGGTTC 723253
Query 260122 GTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCA 260181
|| ||||| |||| |||||||||||||| || ||| |||| || | || ||||||||
Sbjct 723254 TTCTAACGGTATTGTTCCCATGCTTCGCGTGTTCAACAACACTGCCAGATATGTCGACCA 723313
Query 260182 G 260182
|
Sbjct 723314 G 723314
>seq27
Length=857455
Score = 87.8 bits (96), Expect = 3e-11
Identities = 178/259 (69%), Gaps = 4/259 (2%)
Strand=Plus/Minus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||||| ||||| || | ||||| | ||||| | | || | || || || |
Sbjct 682595 ATCATCGTTGAGGCTGTGGCCATCGAACAGGAGTTCTTGACAGACGCTCTTCCTGTCGGC 682536
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
||| | ||||||||| | | ||| |||||||||||||||| | || || || ||||| |
Sbjct 682535 CTCCTGGGCATGAACTCTAA-GCTGATGTGCCAGTACATTG-AGTTCGTTGCTGACCGGC 682478
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
|| | | || ||||| | ||||| ||||| | | ||||| ||| | |||
Sbjct 682477 TGTTGGTCGCCCTCGGAAAC-AAGAAGTACTACAACTCTCCAAACCCCTTCGACTTCATG 682419
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761
||| ||||| || | || ||||||||||| || ||| || | ||| || |||
Sbjct 682418 GAGAGTATCTCTCTTGCAGGAAAGACCAACTTCTTTGAGAAGCGTGTTGGTGACTACCAG 682359
Query 1456762 AAGGCCGGCGTCACCGCCA 1456780
|||||||| |||| ||||
Sbjct 682358 AAGGCCGGTGTCATGGCCA 682340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177711951058698
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |