Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq38 132 4e-26 seq160 96.9 3e-15 >seq38 Length=883156 Score = 132 bits (146), Expect = 4e-26 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||||||||||||||| |||| ||| || || |||| |||||||||||||| || || Sbjct 701418 TCCTTTTGAATGTTGTAGTCGGACAAAGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAA 701477 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| ||||||||||| | ||| | || |||||| ||| ||||| ||| | | | Sbjct 701478 ATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTCGACTTGACATTG 701537 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||||| || || ||||||| ||||| || || ||||| | ||| || || Sbjct 701538 TCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACG 701597 Query 35726 AATATCTGCAT 35736 || || ||||| Sbjct 701598 AAGATTTGCAT 701608 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568 |||||| || | | || ||||| || | || |||||||| |||||||||||||||| Sbjct 700925 TCCACCGCGCAGACGCAGCACCAGGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCGGA 700984 Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 | ||| | | | || |||| ||||||||| || || || | ||||||||||| | || Sbjct 700985 GAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGG 701044 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCA 35687 || | ||||||||| |||||| ||||| |||| | | || || || || | Sbjct 701045 AATTCCCTCCTTGTCTTGGATCTTGCTCTTCA-CGTTGTCGATTGTATCAGAGGACTCAA 701103 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| || || || || || || | || || || || |||||||| Sbjct 701104 CCTCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 701152 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||||||||||||||| | |||||| || | || || || ||||| || ||||| Sbjct 701190 TCCTTTTGAATGTTGTAATCAGACAAGGTACGACCATCTTCAAGTTGCTTTCCAGCAAAG 701249 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||| || || | ||||| | |||||| ||| ||||| ||| | | | Sbjct 701250 ATGAGACGCTGTTGATCGGGAGGAATACCCTCCTTATCCTGAATCTTGCTCTTGACATTG 701309 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || || || || | ||||| || || || || | ||| ||||| Sbjct 701310 TCGATGGTGTCTGAAGACTCGACTTCTAATGTGATAGTCTTTCCGGTAAGAGTCTTCACG 701369 Query 35726 AATATCTGCAT 35736 || || ||||| Sbjct 701370 AAAATTTGCAT 701380 >seq160 Length=150305 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| ||| || ||| || | || || ||||||||||| || || | Sbjct 102200 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 102141 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| ||||||||||| | || | | |||||||||| |||||| ||| | | | Sbjct 102140 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGT 102081 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726 | | ||||||||||| || || || | || || || |||||||||| || || || | Sbjct 102080 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 102021 Query 35727 A 35727 | Sbjct 102020 A 102020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450787801667320