Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq40 183 4e-41 seq27 120 4e-22 >seq40 Length=974685 Score = 183 bits (202), Expect = 4e-41 Identities = 583/896 (65%), Gaps = 6/896 (1%) Strand=Plus/Minus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 || || || || || |||||||| ||| ||||| |||||| ||||| | || | | Sbjct 723553 TCAAACTCGTCGCCATAAACATCAGCCAGGCCAGGGGCTTCATTGGGACAGAACAGAGTC 723494 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 || | | | || |||||| ||||| || ||||| || |||| ||||| || Sbjct 723493 CAGTCGCCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGAGCGTAGAAC 723434 Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696 ||||| | || ||| ||| || || || ||| || |||||| | ||||| | Sbjct 723433 AGATCACGGGCTCTGACTTCCTCCTTACCGTGATTCTTGCGAAGATCCAAGAACTCAAAG 723374 Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756 | ||| | ||||| || || || || || || | | || || || || ||||||||| Sbjct 723373 ACATCGGCGTGCCAAGGCTCGAGGTAAATAGCGAAAGCGCCAGGGCGCTTGTTTCCTCCC 723314 Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816 || || | |||||||||||||| || | || | ||||| |||| |||||| ||||| Sbjct 723313 TGGTCGACATATCTGGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAA 723254 Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCT 69876 ||| || || ||| ||| || ||| | || || || || ||||| Sbjct 723253 GAACCGTTGGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGACCG 723194 Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936 || || || || | || ||||| | |||||| || | ||||| || ||||| || Sbjct 723193 ATACCACCGGCGGTCTTCGAGATCATGGCACAAGTCTTGAGAGTGTCGTAGATACCTTCA 723134 Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCC 69996 |||||||| || |||| | | || || || | || || | || ||| || Sbjct 723133 ATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCCAGCTGGGGCTGGGGAGTCCCA 723074 Query 69997 GCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTT 70056 ||||| || | ||||||||| || |||||||| |||| | || | |||| ||| || Sbjct 723073 GCATTGAACAGTGTAGGAGACGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGTC 723014 Query 70057 TCAATAGCTGATTCTAT-ATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATG 70115 ||||| || ||| || | || | ||||| || | || ||||||||||||| || Sbjct 723013 TCAATGGCCTTTTCAATGTTGTTACCG-TGAATACCGACGGCAACACGCATCAACAAGTG 722955 Query 70116 CTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTT 70175 ||| || || || | || || ||| || |||||| || || || || || Sbjct 722954 CTGGGGACGCTCAGCAACCTTGCCGTTGATTCGCAGCAGGTAGGAACGCTCAAGTGTCTT 722895 Query 70176 AAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATC 70235 || || ||| ||||||| ||||| | ||||| | |||| |||| || || | ||| Sbjct 722894 GAAGCCGAAAAAGTTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTTGAGCTCATC 722835 Query 70236 CTTATATTTGGTAACTATATCCATAACAGTAGGT-GAGATAATCGGAGATCGTTTACCAT 70294 || ||| | || || | |||| | | || || || || | ||| | Sbjct 722834 GGCATGTTTCATGACAAT-TTCATACGTCTCTTTCGATATCATTGGCGCGGGTTGCTTGT 722776 Query 70295 TTTTAGGATTAACATAGTTGAATAAATCTTCCATTA-CATCACTAAATAGtttttttGTT 70353 | || || || ||||||| ||| | |||| || | || | || | | || || ||| Sbjct 722775 TCTTGGGGTTGACATAGTGGAAGAGATCTGAGATGACCAGCGAGAACT-GCTTCTTGGTT 722717 Query 70354 TCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409 | |||||| | || || | |||||| | ||| ||||| || ||||| || || || Sbjct 722716 TGCTTGTGGAGGTTGGAAACGGCTATACGGGCAGCTAGGATGGCATAATCGGGGTG 722661 >seq27 Length=857455 Score = 120 bits (132), Expect = 4e-22 Identities = 295/443 (67%), Gaps = 6/443 (1%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 || ||||| |||||||| || ||||| || || || || || ||| | | || ||| | Sbjct 682357 TTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTTCCTGCAAGAGAGATACTC 682416 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 |||||||| || || || || | | || || | || || ||| | | | | Sbjct 682417 TCCATGAAGTCGAAGGGGTTTGGAGAGTTGTAGTACTTCTTGTTTCCGAGGGCGACCAAC 682476 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | | || ||||| || || ||||| ||||| | | | ||||| || | ||| Sbjct 682477 AGCCGGTCAGCAACGAACTCAATGTACTGGCACATCAGCTTAGAGTTCATGCCCAGGAGG 682536 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565 || || ||||| || || | ||||| | ||||||| | || ||||| || || Sbjct 682537 CCGACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCGATGGCCACAGCCTCAACGATGAT- 682595 Query 39566 GATGTT--ACTACCTCATCACTCGGTG-GATGCAATAAATGTTTAAACATTAAGCAGGCG 39622 || | || |||| | |||| | |||| ||| || |||| | |||||| Sbjct 682596 -ATCCTCAACAACCTTCTTG-TCGGGGCGATGGTTTAAGTGCGAGAACAGAAGGCAGGCA 682653 Query 39623 AAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGC 39682 |||||| || || ||||| || | | || | ||||| || || ||||| || ||| Sbjct 682654 AAGTCAGTGTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCCGGC 682713 Query 39683 ATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCT 39742 || | |||||||| || ||||| || |||| ||||||||||||||| |||||||| || Sbjct 682714 ATCAATCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAGAAGATTCCC 682773 Query 39743 TCTACTGCTGCAAATGCAACAAG 39765 || || || || || || ||||| Sbjct 682774 TCCACAGCAGCGAAGGCCACAAG 682796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686899964635560