Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq40 183 4e-41
seq27 120 4e-22
>seq40
Length=974685
Score = 183 bits (202), Expect = 4e-41
Identities = 583/896 (65%), Gaps = 6/896 (1%)
Strand=Plus/Minus
Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576
|| || || || || |||||||| ||| ||||| |||||| ||||| | || | |
Sbjct 723553 TCAAACTCGTCGCCATAAACATCAGCCAGGCCAGGGGCTTCATTGGGACAGAACAGAGTC 723494
Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636
|| | | | || |||||| ||||| || ||||| || |||| ||||| ||
Sbjct 723493 CAGTCGCCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGAGCGTAGAAC 723434
Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696
||||| | || ||| ||| || || || ||| || |||||| | ||||| |
Sbjct 723433 AGATCACGGGCTCTGACTTCCTCCTTACCGTGATTCTTGCGAAGATCCAAGAACTCAAAG 723374
Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756
| ||| | ||||| || || || || || || | | || || || || |||||||||
Sbjct 723373 ACATCGGCGTGCCAAGGCTCGAGGTAAATAGCGAAAGCGCCAGGGCGCTTGTTTCCTCCC 723314
Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816
|| || | |||||||||||||| || | || | ||||| |||| |||||| |||||
Sbjct 723313 TGGTCGACATATCTGGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAA 723254
Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCT 69876
||| || || ||| ||| || ||| | || || || || |||||
Sbjct 723253 GAACCGTTGGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGACCG 723194
Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936
|| || || || | || ||||| | |||||| || | ||||| || ||||| ||
Sbjct 723193 ATACCACCGGCGGTCTTCGAGATCATGGCACAAGTCTTGAGAGTGTCGTAGATACCTTCA 723134
Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCC 69996
|||||||| || |||| | | || || || | || || | || ||| ||
Sbjct 723133 ATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCCAGCTGGGGCTGGGGAGTCCCA 723074
Query 69997 GCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTT 70056
||||| || | ||||||||| || |||||||| |||| | || | |||| ||| ||
Sbjct 723073 GCATTGAACAGTGTAGGAGACGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGTC 723014
Query 70057 TCAATAGCTGATTCTAT-ATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATG 70115
||||| || ||| || | || | ||||| || | || ||||||||||||| ||
Sbjct 723013 TCAATGGCCTTTTCAATGTTGTTACCG-TGAATACCGACGGCAACACGCATCAACAAGTG 722955
Query 70116 CTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTT 70175
||| || || || | || || ||| || |||||| || || || || ||
Sbjct 722954 CTGGGGACGCTCAGCAACCTTGCCGTTGATTCGCAGCAGGTAGGAACGCTCAAGTGTCTT 722895
Query 70176 AAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATC 70235
|| || ||| ||||||| ||||| | ||||| | |||| |||| || || | |||
Sbjct 722894 GAAGCCGAAAAAGTTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTTGAGCTCATC 722835
Query 70236 CTTATATTTGGTAACTATATCCATAACAGTAGGT-GAGATAATCGGAGATCGTTTACCAT 70294
|| ||| | || || | |||| | | || || || || | ||| |
Sbjct 722834 GGCATGTTTCATGACAAT-TTCATACGTCTCTTTCGATATCATTGGCGCGGGTTGCTTGT 722776
Query 70295 TTTTAGGATTAACATAGTTGAATAAATCTTCCATTA-CATCACTAAATAGtttttttGTT 70353
| || || || ||||||| ||| | |||| || | || | || | | || || |||
Sbjct 722775 TCTTGGGGTTGACATAGTGGAAGAGATCTGAGATGACCAGCGAGAACT-GCTTCTTGGTT 722717
Query 70354 TCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409
| |||||| | || || | |||||| | ||| ||||| || ||||| || || ||
Sbjct 722716 TGCTTGTGGAGGTTGGAAACGGCTATACGGGCAGCTAGGATGGCATAATCGGGGTG 722661
>seq27
Length=857455
Score = 120 bits (132), Expect = 4e-22
Identities = 295/443 (67%), Gaps = 6/443 (1%)
Strand=Plus/Plus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
|| ||||| |||||||| || ||||| || || || || || ||| | | || ||| |
Sbjct 682357 TTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTTCCTGCAAGAGAGATACTC 682416
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445
|||||||| || || || || | | || || | || || ||| | | | |
Sbjct 682417 TCCATGAAGTCGAAGGGGTTTGGAGAGTTGTAGTACTTCTTGTTTCCGAGGGCGACCAAC 682476
Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505
| | || ||||| || || ||||| ||||| | | | ||||| || | |||
Sbjct 682477 AGCCGGTCAGCAACGAACTCAATGTACTGGCACATCAGCTTAGAGTTCATGCCCAGGAGG 682536
Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565
|| || ||||| || || | ||||| | ||||||| | || ||||| || ||
Sbjct 682537 CCGACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCGATGGCCACAGCCTCAACGATGAT- 682595
Query 39566 GATGTT--ACTACCTCATCACTCGGTG-GATGCAATAAATGTTTAAACATTAAGCAGGCG 39622
|| | || |||| | |||| | |||| ||| || |||| | ||||||
Sbjct 682596 -ATCCTCAACAACCTTCTTG-TCGGGGCGATGGTTTAAGTGCGAGAACAGAAGGCAGGCA 682653
Query 39623 AAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGC 39682
|||||| || || ||||| || | | || | ||||| || || ||||| || |||
Sbjct 682654 AAGTCAGTGTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCCGGC 682713
Query 39683 ATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCT 39742
|| | |||||||| || ||||| || |||| ||||||||||||||| |||||||| ||
Sbjct 682714 ATCAATCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAGAAGATTCCC 682773
Query 39743 TCTACTGCTGCAAATGCAACAAG 39765
|| || || || || || |||||
Sbjct 682774 TCCACAGCAGCGAAGGCCACAAG 682796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686899964635560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |