Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq40 107 2e-18
seq38 100 2e-16
>seq40
Length=974685
Score = 107 bits (118), Expect = 2e-18
Identities = 279/422 (66%), Gaps = 5/422 (1%)
Strand=Plus/Minus
Query 131613 TGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCA 131672
||||||| | || | ||| ||||||| |||||||||||||| |||| ||| ||
Sbjct 723510 TGGGACAGAACAGAGTCCAGTCGCCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGG 723451
Query 131673 CCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCA 131732
||| | ||||| |||||||| | ||| | || || |||| | ||| || |
Sbjct 723450 TCCACAGAGCGTAGAACAGATCACGGGCTCTGACTTCCTCCTTACCG-TGATTCTTGCGA 723392
Query 131733 A-ATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCT 131791
| || || || || || | || || ||||| || || | || | || | |||||
Sbjct 723391 AGATCCAAGAACTCAAAGACATCGGCGTGCCAAGGCTCGAGGTAAATAGCGAAAGCGCCA 723332
Query 131792 TTGCGCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATG 131848
|||||| || || || | |||| | | |||||||| | ||||| | ||||
Sbjct 723331 GGGCGCTTGTTTCCTCCCTGGTCGACATATCTGGCAGTGTTGTTGAACACGCGAAGCATG 723272
Query 131849 GGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATT 131908
|| | | |||||| | || ||||||| ||||||| ||| |||| | |||
Sbjct 723271 GGAACAATACCGTTAGAAGAACCGTTGGTGCCACCAATGTAGGAGCCTGTGGCACGGATG 723212
Query 131909 TTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCATTTGGTTAGA 131968
||||||||| || || ||||| ||| || || ||||| | || || | | |||
Sbjct 723211 CGGTGAACGTTAAGACCGATACCACCGGCGGTCTTCGAGATCATGGCACAAGTCTTGAGA 723152
Query 131969 GTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACAAC 132028
|||| ||||||||||| | ||| ||| | || ||||| | |||||||| | || |
Sbjct 723151 GTGTCGTAGATACCTTCAATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCCAGC 723092
Query 132029 TG 132030
||
Sbjct 723091 TG 723090
>seq38
Length=883156
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || |||||||| ||||| || || | | || | ||||| || || || ||
Sbjct 701184 GTGGATTCCTTTTGAATGTTGTAATCAGACAAGGTACGACCATCTTCAAGTTGCTTTCCA 701243
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
|| | ||||||||||||||||| || || | |||||| ||||| |||||| | ||
Sbjct 701244 GCAAAGATGAGACGCTGTTGATCGGGAGGAATACCCTCCTTATCCTGAATCTTGCTCTTG 701303
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | || | ||||||| | || ||||||| || |||| || || || |||||
Sbjct 701304 ACATTGTCGATGGTGTCTGAAGACTCGACTTCTAATGTGATAGTCTTTCCGGTAAGAGTC 701363
Query 27231 TTCACAAAGATTTGCATA 27248
||||| || |||||||||
Sbjct 701364 TTCACGAAAATTTGCATA 701381
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || |||||||| ||||||||| || |||| |||| || ||||| |||||
Sbjct 701412 GTCGATTCCTTTTGAATGTTGTAGTCGGACAAAGTGCGGCCGTCCTCCAGCTGCTTACCA 701471
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| |||| || ||||| || || || || | ||||| ||||| ||||| ||
Sbjct 701472 GCGAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTCGACTTG 701531
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | || | |||||| ||| || || || | || || | |||||||| |||||
Sbjct 701532 ACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTC 701591
Query 27231 TTCACAAAGATTTGCAT 27247
|| || |||||||||||
Sbjct 701592 TTGACGAAGATTTGCAT 701608
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| ||||||| |||| |||| || | || || || ||||| ||||| |||
Sbjct 700926 CCACCGCGCAGACGCAGCACCAGGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCGGAG 700985
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | | | | ||||| | ||| ||||| ||| | ||||||||||| || || || ||
Sbjct 700986 AGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGA 701045
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| || || ||||||| | |||| | | || | || || | || |||||
Sbjct 701046 ATTCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCGATTGTATCAGAGGACTCAACC 701105
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || || | || || || || || || || ||||| ||||||
Sbjct 701106 TCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCATA 701153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424929070924248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |