Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq40 107 2e-18 seq38 100 2e-16 >seq40 Length=974685 Score = 107 bits (118), Expect = 2e-18 Identities = 279/422 (66%), Gaps = 5/422 (1%) Strand=Plus/Minus Query 131613 TGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCA 131672 ||||||| | || | ||| ||||||| |||||||||||||| |||| ||| || Sbjct 723510 TGGGACAGAACAGAGTCCAGTCGCCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGG 723451 Query 131673 CCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCA 131732 ||| | ||||| |||||||| | ||| | || || |||| | ||| || | Sbjct 723450 TCCACAGAGCGTAGAACAGATCACGGGCTCTGACTTCCTCCTTACCG-TGATTCTTGCGA 723392 Query 131733 A-ATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCT 131791 | || || || || || | || || ||||| || || | || | || | ||||| Sbjct 723391 AGATCCAAGAACTCAAAGACATCGGCGTGCCAAGGCTCGAGGTAAATAGCGAAAGCGCCA 723332 Query 131792 TTGCGCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATG 131848 |||||| || || || | |||| | | |||||||| | ||||| | |||| Sbjct 723331 GGGCGCTTGTTTCCTCCCTGGTCGACATATCTGGCAGTGTTGTTGAACACGCGAAGCATG 723272 Query 131849 GGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATT 131908 || | | |||||| | || ||||||| ||||||| ||| |||| | ||| Sbjct 723271 GGAACAATACCGTTAGAAGAACCGTTGGTGCCACCAATGTAGGAGCCTGTGGCACGGATG 723212 Query 131909 TTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCATTTGGTTAGA 131968 ||||||||| || || ||||| ||| || || ||||| | || || | | ||| Sbjct 723211 CGGTGAACGTTAAGACCGATACCACCGGCGGTCTTCGAGATCATGGCACAAGTCTTGAGA 723152 Query 131969 GTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACAAC 132028 |||| ||||||||||| | ||| ||| | || ||||| | |||||||| | || | Sbjct 723151 GTGTCGTAGATACCTTCAATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCCAGC 723092 Query 132029 TG 132030 || Sbjct 723091 TG 723090 >seq38 Length=883156 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || |||||||| ||||| || || | | || | ||||| || || || || Sbjct 701184 GTGGATTCCTTTTGAATGTTGTAATCAGACAAGGTACGACCATCTTCAAGTTGCTTTCCA 701243 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | ||||||||||||||||| || || | |||||| ||||| |||||| | || Sbjct 701244 GCAAAGATGAGACGCTGTTGATCGGGAGGAATACCCTCCTTATCCTGAATCTTGCTCTTG 701303 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||||| | || ||||||| || |||| || || || ||||| Sbjct 701304 ACATTGTCGATGGTGTCTGAAGACTCGACTTCTAATGTGATAGTCTTTCCGGTAAGAGTC 701363 Query 27231 TTCACAAAGATTTGCATA 27248 ||||| || ||||||||| Sbjct 701364 TTCACGAAAATTTGCATA 701381 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || |||||||| ||||||||| || |||| |||| || ||||| ||||| Sbjct 701412 GTCGATTCCTTTTGAATGTTGTAGTCGGACAAAGTGCGGCCGTCCTCCAGCTGCTTACCA 701471 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| |||| || ||||| || || || || | ||||| ||||| ||||| || Sbjct 701472 GCGAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTCGACTTG 701531 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | |||||| ||| || || || | || || | |||||||| ||||| Sbjct 701532 ACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTC 701591 Query 27231 TTCACAAAGATTTGCAT 27247 || || ||||||||||| Sbjct 701592 TTGACGAAGATTTGCAT 701608 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| |||| |||| || | || || || ||||| ||||| ||| Sbjct 700926 CCACCGCGCAGACGCAGCACCAGGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCGGAG 700985 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | | | ||||| | ||| ||||| ||| | ||||||||||| || || || || Sbjct 700986 AGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGA 701045 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||||| | |||| | | || | || || | || ||||| Sbjct 701046 ATTCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCGATTGTATCAGAGGACTCAACC 701105 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | || || || || || || || ||||| |||||| Sbjct 701106 TCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCATA 701153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424929070924248