Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq40 113 6e-20 seq27 82.4 1e-10 >seq40 Length=974685 Score = 113 bits (124), Expect = 6e-20 Identities = 460/718 (64%), Gaps = 14/718 (2%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||||||||| | ||||| || || || ||||| || |||| || || |||| Sbjct 724382 GTAGATGTTCGAGGTGTAAGGCTCGAAACATTCGTTGAAGCCCAGAATCTGGCTGGTGCT 724323 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || || ||||||||||||| ||| | |||||| || | ||| |||| || | Sbjct 724322 TGCAGTGGGCATTGGTGCCACCAACAAACTGTTGCGCACACCGTTCTGGGCAATCTTCGC 724263 Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAG 110886 ||| ||| |||||||||| || | | ||| | |||||||||||| |||| || Sbjct 724262 CTTCAGAGCATCCCAGTCCCAGAGGTCCGTGGGGGTTCTGTCCCACATGTCATACTGGAG 724203 Query 110887 CACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAA 110946 | ||||| || ||||||| ||||| |||| ||||| | ||| | | |||| Sbjct 724202 GATACCTTGAGAGACGGGAGAGCCCTCGTAGGTCTCATAAGGACCAAACTCCTTGGCCAG 724143 Query 110947 TTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTC 111006 ||||| || ||| | ||||||| ||||| |||||||| | || | || Sbjct 724142 CTCACAAGAAGCAGTCAGAGCACCGTGATAGATGGTCTCAAAGATCTGGATGTTTAGCTG 724083 Query 111007 CTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGACCTT 111065 |||| || | || || |||| | || ||| || || |||| || ||||| | Sbjct 724082 TCTGGCCTCGGCAGAGTCGAATG-GCAGACGCAGGGCAAGGAAGGCATCGGCCAGACCAT 724024 Query 111066 GAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---AACGG 111122 ||||| | | |||| || | || ||||| || ||| || ||| ||| | Sbjct 724023 TGACACCAAGAGCAATGGGGCGATGGCGCATGTTGCTCTTCTTGGC---CTCGGGAACAG 723967 Query 111123 GATAAAAATTTCTGTCAATGA-CTCGGTTTAGATTTTTGGTAACAATCTTTGTG--ATTT 111179 | ||| | || |||| || | || | | || || | | ||| ||| | | Sbjct 723966 GGTAATAGTTGATGTCGATAATCTTGTTCAAG---TTGCGAACCAAGACTTGCACAACCT 723910 Query 111180 CATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGA 111239 | || || || | | ||| | | | | | | ||| | | ||||| |||| Sbjct 723909 CGTGCAGCTTGCCGAAGTCATATTCTCCACGGGCGGCGTCGACGAAGGTAGGAAGCGCGA 723850 Query 111240 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTAC 111299 || |||| ||||| ||||| || || | | ||||||| | || || || | Sbjct 723849 GAGAAGCCAGGTTGCAGACAGCAACTTCGTCAGGAGCACTGTACTCAATGATCTCCGTGC 723790 Query 111300 ATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCAT 111359 | | ||||| || ||| || |||| ||||| ||||| |||||||||||||| |||| Sbjct 723789 AAAGATTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCAT 723730 Query 111360 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417 ||||||| ||||| |||| | || ||||| ||||| | | |||||||| | ||| Sbjct 723729 CCTTGTAAAGCATAAAGGGGTTGCCAGTCTCGGTCTGAGCCTCAAGAATAGCATACCA 723672 >seq27 Length=857455 Score = 82.4 bits (90), Expect = 1e-10 Identities = 156/226 (69%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| || ||||| || || || || || || || ||||| ||||| Sbjct 682650 GGCAAAGTCAGTGTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACC 682709 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGA 122776 ||||| | || |||||||||| ||| | || | ||| || || || |||||||||| Sbjct 682710 CGGCATCAATCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAA-GATCCAGAGAAGAAGA 682768 Query 122777 TACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGA---CTTTGCAT 122833 | ||||||||| || || || | ||| || | |||||| | ||| ||| | Sbjct 682769 TTCCCTCCACAGCAGCGAAGGCCACAAGACGCTGGGCGAAAG---TAGATTCCTTATCCG 682825 Query 122834 CAAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTAC 122879 || ||| |||| ||||| | |||||||| | ||||| || || Sbjct 682826 AAATCCAGGTCATGGCCCACTGGGCCTTCTTGGCGATACAAGGAAC 682871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628023921938400