Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq38 187 8e-42 seq156 163 9e-35 seq21 147 7e-30 seq142 111 5e-19 >seq38 Length=883156 Score = 187 bits (206), Expect = 8e-42 Identities = 182/232 (78%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || |||||||| || || || || |||||||| || ||||| Sbjct 701150 CATACCACCACGCAGACGGAGGACAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATC 701209 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| || || || |||||||||||||| |||||||||||||| ||||| || ||||| || Sbjct 701210 AGACAAGGTACGACCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGG 701269 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 |||||| || || ||||||||||| || ||| || ||||| || || | || || | | Sbjct 701270 AGGAATACCCTCCTTATCCTGAATCTT-GCTCTTGACATTGTCGATGGTGTCTGAAGACT 701328 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| | ||| | ||||||||||| || || || || ||||| ||||| Sbjct 701329 CGACTTCTAATGTGATAGTCTTTCCGGTAAGAGTCTTCACGAAAATTTGCAT 701380 Score = 138 bits (152), Expect = 3e-27 Identities = 175/237 (74%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 140502 TTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTA 140561 ||| |||| ||||| || | | || || || || ||||| ||| || ||||| || Sbjct 700918 TTTAACAT-CCACCGCGCAGACGCAGCACCAGGTGGAGAGTGCTCTCCTTCTGAATGTTG 700976 Query 140562 TAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGA 140621 ||||| || | || | ||||||||| | || || ||||| ||||| ||||| ||||| Sbjct 700977 TAATCGGAGAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGG 701036 Query 140622 TCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT-ACATTATCAATCGAATCAGA 140680 || || |||||||| || || || || || || ||| || || || || || | |||||| Sbjct 701037 TCTGGGGGAATTCCCTCCTTGTCTTGGATCTT-GCTCTTCACGTTGTCGATTGTATCAGA 701095 Query 140681 TGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| || ||||||| ||||||||||| ||||| || || || |||||||| Sbjct 701096 GGACTCAACCTCCAGTGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 701152 Score = 122 bits (134), Expect = 3e-22 Identities = 170/236 (72%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || || |||||||| || || |||||||| || | Sbjct 701374 TTTGCATACCACCACGCAGACGAAGGACGAGGTGAAGAGTCGATTCCTTTTGAATGTTGT 701433 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || || || || || || || || || || ||||| || || || || ||||| | Sbjct 701434 AGTCGGACAAAGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGT 701493 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 ||||||| || || || ||||||||||| || | || ||||| ||||| | || | || Sbjct 701494 CAGGAGGGATGCCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTC-GCTG 701552 Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || | || | ||||| || || || || || || || || ||||| Sbjct 701553 GACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAGATTTGCAT 701608 >seq156 Length=371902 Score = 163 bits (180), Expect = 9e-35 Identities = 477/732 (65%), Gaps = 7/732 (1%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 ||||| | || || || || ||||| || || || ||||| | ||| | | |||| | Sbjct 88607 CCGCTGTCGGTATTGACTTGGGTACCACCTACTCCTGTGTGGGTGTCTTCAGAGATGACC 88548 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| || || || || || |||||| | || || || || | ||| || || | Sbjct 88547 GCATTGAAATCATCGCCAACGACCAGGGTAACCGTACTACTCCCTCGTTCGTGGCTTTCA 88488 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| | || |||||| | || || || || | || || || | | Sbjct 88487 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCTCACA 88428 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACA 349434 | || || || ||||||||||| || || ||| | | || || | | | || Sbjct 88427 ACACCGTCTTCGATGCTAAGCGTCTGATCGGTCGTCGGTTCCAAGATGCTGAGGTTCAG- 88369 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 |||||| | || || | || || | || | || | | | || || | || Sbjct 88368 -TCTGATATGAAGCACTGGCCCTTCAAGGTCATCGAGAAGGCCAGC---AAGCCCGTCAT 88313 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 ||||||||| | || || || || || || || ||||| || || || ||||| Sbjct 88312 TGAGGTTGAGTTCAAGGGCGAGACCAAGCAGTTCACTCCTGAAGAGATCTCCTCCATGGT 88253 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | || ||| || | ||||| || || | |||| || || | | ||||| Sbjct 88252 CCTGACCAAGATGCGTGAGACCGCTGAGGCCTACCTCGGTGGTACTGTCAACAACGCTGT 88193 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 || ||||| || ||||| || || || | |||||| || || || |||||||| Sbjct 88192 CATCACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGATGCTGGTCT 88133 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 ||| || || | || || || | || || || || || ||||| || || ||||| || Sbjct 88132 CATCGCCGGCCTGAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCTGCCATTGCCTA 88073 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || ||||| || | | || || || | || || || ||| | |||||||| Sbjct 88072 CGGTCTTGACAAGAAGGCCGAGGGCGAGCGTAACGTCCTGATCTTCGATCTTGGTGGTGG 88013 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 |||||| ||||| || || || || |||| ||||| || || || || || || || || Sbjct 88012 TACTTTCGATGTTTCCCTTCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGGCTACCGC 87953 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 |||||| || || || ||||| || || || || || ||||| ||| || || || || Sbjct 87952 TGGTGACACTCACCTGGGTGGTGAGGACTTCGACAACCGTCTGGTTAACCACTTCGTAAA 87893 Query 349915 AGAATTTAAGCG 349926 ||||| || || Sbjct 87892 CGAATTCAAACG 87881 >seq21 Length=293296 Score = 147 bits (162), Expect = 7e-30 Identities = 332/493 (67%), Gaps = 7/493 (1%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 ||||| || || || ||||| ||||| || ||| ||| ||| || || || |||||| Sbjct 276972 GCTGTCATCACCGTGCCAGCTTATTTCAACGATAACCAACGTCAGGCGACGAAGGATGCT 276913 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || || |||||||| | || || ||||| ||||||||||| || || Sbjct 276912 GGTGCCATTGCCGGTTTGAATGTTCTCCGCATCATCAATGAGCCCACTGCTGCCGCTATC 276853 Query 349730 GCATATGGGCTTG---ATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786 || ||||| || | || | ||| | ||| ||| | || || | |||| | Sbjct 276852 GCCTATGGACTCGGCTCCGGAAGGTCTGAAAAGGAACGTAATGTCCTGATCTATGATCTT 276793 Query 349787 GGTGGTGGTACTTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 ||||| || ||||| ||||| || || || |||| | ||| || |||| ||||| Sbjct 276792 GGTGGAGGCACTTTCGATGTGTCTCTTCTCAACA-TCCAAGGAGGTGTTTTCACTGTTAA 276734 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCA 349905 || || || |||||||| ||||| |||||| |||||||||| | | ||| || || Sbjct 276733 GGCCACAGCCGGTGATACTCATCTCGGTGGACAAGATTTTGACACTAACCTCCTTGAACA 276674 Query 349906 TTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAAT 349965 || || ||||| || | || || ||| || || || | || || | Sbjct 276673 CTTCAAGAAGGAATTCCAGAAGAAGACTGGAAAGGATCTTTCAGGCGATGCCAGGGCTCT 276614 Query 349966 GCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAAC 350025 || || | ||||| || || || ||||| |||||| | | || | || || || Sbjct 276613 TCGCCGTTTGAGAACGGCATGCGAGCGTGCCAAGCGTACACTGTCTAACGCCACACAGAC 276554 Query 350026 CTCTATTGAAATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACACGTG 350084 ||| |||| ||||| ||| ||| | ||||| | |||||| || ||||| || |||| Sbjct 276553 TTCTGTTGAGATTGACTCT-TTGTTCGATGGAGAGGATTTCAACTCGTCTATCACTCGTG 276495 Query 350085 CTCGGTTTGAAGA 350097 | || ||||| || Sbjct 276494 CCCGCTTTGAGGA 276482 >seq142 Length=918545 Score = 111 bits (122), Expect = 5e-19 Identities = 208/306 (68%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 378168 GTTTCTTACAGTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCG 378227 |||||| ||||| |||||| ||||||| | ||||| || || |||| || ||| Sbjct 199921 GTTTCTCACAGTACCATCATACTTAACCATGACCTCTTCCAAGGCCTTAACCAGCTTTCG 199862 Query 378228 AGAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACC 378287 |||||||||||||| ||| || || |||||||| || | ||| | ||||| | Sbjct 199861 CTGAATATAACCAGTTTCGGCAGTCTTGACAGCAGTATCGATCAGACCTTCTCGACCGGC 199802 Query 378288 CATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAA 378347 ||| ||||||||||| ||||| || || || || |||| | | ||||| | || | ||| Sbjct 199801 CATGGCATGGAAGAAGAATTCGGTTGGGGTTAGACCACGCAGATATGAATTTTCCACAAA 199742 Query 378348 TCCTCTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAA 378407 ||| | | | || || | |||| || || |||| || | ||||||| | || Sbjct 199741 TCCGCGAGATTCCGGAGAGTAGTCATCCTTGGTGAAATGGGGAAGAGTACGATATTTGAA 199682 Query 378408 CCCATATGGAATTCGTTTTCCATCAACATTCTGTTGACCAAGTGCAGAAACCATTTGAGC 378467 || | ||||| || || || || || ||| || || | ||| | ||| |||| Sbjct 199681 TCCGAAAGGAATACGCTTGCCTTCGACGGACTGCTGGCCCACAACAGCAGTCATCTGAGA 199622 Query 378468 AATATT 378473 ||||| Sbjct 199621 GATATT 199616 Score = 96.9 bits (106), Expect = 1e-14 Identities = 105/139 (76%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || || |||||| | || || ||| || || | |||||||||||||||||||| || Sbjct 200646 CGAGGAACACCAAGGGTGACGTTC---TTCGACGAGACACCAGCAAAGTGGAAAGTGTTC 200590 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 | || | || |||| |||||||||||| ||||| || |||| |||||||||||||| Sbjct 200589 AAGGTCATCTGTGTAGCGGGCTCACCAATAGACTGAGCGGCAAGCACGCCAACCATTTCA 200530 Query 377578 CCAGGATTGACAATAGCCT 377596 || || || || ||||| Sbjct 200529 CCTGGGTTAGCACCAGCCT 200511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515234422791287