Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq38 176 5e-39 seq160 136 5e-27 seq65 111 2e-19 seq663 107 2e-18 seq40 107 2e-18 >seq38 Length=883156 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || |||||||| || || | ||||| ||||| | Sbjct 701608 ATGCAAATCTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGC 701549 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||| | || |||||||| |||||||| || ||||| |||||| Sbjct 701548 GACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAG 701489 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| ||||||||||| || ||||| | || || | | ||||| || Sbjct 701488 CAGCGCCTGATTTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACTTTGTCCGACTACAAC 701429 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||||||| |||||||| || ||| | ||||| || ||||| Sbjct 701428 ATTCAAAAGGAATCGACTCTTCACCTCGTCCTTCGTCTGCGTGGTGG 701382 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| |||||||| |||||||| || | || || ||||| Sbjct 701380 ATGCAAATTTTCGTGAAGACTCTTACCGGAAAGACTATCACATTAGAAGTCGAGTCTTCA 701321 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| || |||||||| |||||||| |||||||| || || Sbjct 701320 GACACCATCGACAATGTCAAGAGCAAGATTCAGGATAAGGAGGGTATTCCTCCCGATCAA 701261 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||| |||||||| || |||| ||||||| | | || || || Sbjct 701260 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGTCGTACCTTGTCTGATTACAAC 701201 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||||||||| || ||||| ||| | ||||| || ||||| Sbjct 701200 ATTCAAAAGGAATCCACACTGCATCTTGTCCTCCGTCTGCGTGGTGG 701154 Score = 168 bits (186), Expect = 8e-37 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||| ||||| ||||| || ||||||||||| | Sbjct 701152 ATGCAGATCTTCGTCAAGACACTCACCGGAAAGACCATTACACTGGAGGTTGAGTCCTCT 701093 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | || ||||| || || || ||||||||||||||||| ||||||||| Sbjct 701092 GATACAATCGACAACGTGAAGAGCAAGATCCAAGACAAGGAGGGAATTCCCCCAGACCAG 701033 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||||||||| | || |||| | ||||| | || || || Sbjct 701032 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTACAAC 700973 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || ||||| |||||| || || || ||||||| ||||||||| Sbjct 700972 ATTCAGAAGGAGAGCACTCTCCACCTGGTGCTGCGTCTGCGCGGTGGA 700925 >seq160 Length=150305 Score = 136 bits (150), Expect = 5e-27 Identities = 141/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || || |||||||| | || | ||| Sbjct 102020 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 102079 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||||| || || |||||||||||||| || || || ||||||||||| || Sbjct 102080 GACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTG 102139 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || || ||||||||||| || ||||||| || ||||| ||| ||||| || |||| || Sbjct 102140 ATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 102198 Query 27594 GG 27595 || Sbjct 102199 GG 102200 >seq65 Length=534987 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||||||||| || |||||||||||||| || || ||||| ||||| |||||| Sbjct 174255 GACAAGGAGGGAATTCCCCCCGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 174196 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | |||||||| | ||||| || |||| ||||| || || || || || || | Sbjct 174195 GACGGCCGTACCCTTTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACCTCGTGCTC 174136 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 174135 CGCCTGCGTGGTGG 174122 >seq663 Length=274 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 || |||||||| || ||||| ||||||||||| | ||||| ||||| ||||| |||||| Sbjct 274 GATAAGGAGGGCATCCCTCCTGACCAGCAGCGCTTGATTTTCGCTGGCAAGCAGCTCGAG 215 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| || || || | |||||||| | || |||||||| || || || || || | Sbjct 214 GATGGCCGCACTCTCTCCGACTATAACATTCAGAAGGAATCTACCCTGCACCTGGTTCTC 155 Query 27619 CGTCTTCGCGGTGG 27632 |||||||| ||||| Sbjct 154 CGTCTTCGTGGTGG 141 >seq40 Length=974685 Score = 107 bits (118), Expect = 2e-18 Identities = 394/610 (65%), Gaps = 13/610 (2%) Strand=Plus/Minus Query 81148 TCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGC 81207 || |||| | | || | || |||| ||| | ||| || || || || | ||| | Sbjct 723553 TCAAACTCGTCGCCATAAACATCAGCCAGGCCAGGGGCTTCATTGGGACAGAACAGAGTC 723494 Query 81208 CAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAAC 81267 |||||| || | ||| || ||||||||| |||||| |||| || ||| |||| Sbjct 723493 CAGTCGCCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGAGCGTAGAAC 723434 Query 81268 AGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATG 81327 || || ||| | | ||||| | ||| || || ||| | || | || || | | Sbjct 723433 AGATCACGGGCTCTGACTTCCTCCTTACCGTGATTCTTGCGAAGATCCAAGAACTCAAAG 723374 Query 81328 ATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACGG---CCACCC 81384 | || || ||||| ||||| || || | |||| | || ||| | || ||| Sbjct 723373 ACATCGGCGTGCCAAGGCTCGAGGTAAATAGCGAAAGCGCCAGGGCGCTTGTTTCCTCCC 723314 Query 81385 TGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGAC 81444 |||| ||| || | |||||| ||| || || || | ||| || | ||||| | || Sbjct 723313 TGGTCGACATATCTGGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAA 723254 Query 81445 TGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGC--TGATTGA-AAGA 81501 |||||| || || | || || || |||| || | ||| ||| | |||| Sbjct 723253 GAACCGTTGGTGCCACCAATGTAGGAGCCTGTGGCACGGA---TGCGGTGAACGTTAAGA 723197 Query 81502 CCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCC 81561 ||||| ||||| | ||| || ||| ||||| || | || || || || || Sbjct 723196 CCGATACCACCGGCGGTCTTCGAGATCATGGCACAAGTCTTGAGAGTGTCGTAGATACCT 723137 Query 81562 TCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG 81621 || |||||||| | ||||| || | | ||| || | || ||| ||||| ||| Sbjct 723136 TCAATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCCAGCTG-GGGCTGGG-GAG 723079 Query 81622 --CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCAT 81679 || |||||||||||||| || | ||| ||| |||| || | ||||| || | | Sbjct 723078 TCCCAGCATTGAACAGTGTAGGAGACGCATGAGTGAAGTATTTCTGGGACATGAGATGGT 723019 Query 81680 AGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACA 81739 |||| || || | | ||| | || |||||||||||||| || |||||||| |||| Sbjct 723018 AGGTCTCAATGGCCTTTTCAATGTTGTTACCGTGAATACCGACGGCAACACGCATCAACA 722959 Query 81740 TGTACTGGGG 81749 || |||||| Sbjct 722958 AGTGCTGGGG 722949 Score = 98.7 bits (108), Expect = 1e-15 Identities = 682/1089 (63%), Gaps = 40/1089 (4%) Strand=Plus/Minus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || ||||| ||||||||||| ||||| || ||| ||||||| || | ||||||| Sbjct 724729 GTACGCAGGTAGTACATGCCAGTCTTCAGACCCATCTTCCATCCAGCAAAGTGCATACTG 724670 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 ||||||| | | || || | || || | ||||||||||| |||||||| ||| Sbjct 724669 GTGAGCTTGCCCATGGTAGGCTCCTTCAGGTGAATGTTCAGAGATTGAGACTGGTCAATG 724610 Query 80158 AAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTA 80217 ||||| ||||| || || ||||||| | || | || | |||||||| || || Sbjct 724609 AAAGCACCACGGTCGGCGGCCATTTGCAGGATGGCACGCTGGGAGATTTCCCACACGGTC 724550 Query 80218 CGATACA---CCTTACGAAGCTCCTCTGGAATGTCCAGA---TTTTGCACACTGCCACCG 80271 || | |||| || || | ||||| | || || || || ||||| Sbjct 724549 TTGTAGAGAGCCTT---AATGTCGGCGGGAATATTGGGAATGTTCTGAACGGAACCACCA 724493 Query 80272 TCCTTTACAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATCTTTC 80331 ||| | || | || |||| | || ||| | ||||| | | ||||| || Sbjct 724492 TCCGCGATGATACGGTTCTTCATGTTGTCCGACCACAGGCCAAGGTCGACAAGATCCTTG 724433 Query 80332 ACAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGA-TACAGGTT 80390 | ||| | ||| | | ||||| || || || || || ||| || | ||| Sbjct 724432 AGAAGCCACGGGTTGACGACCTGGAACTCACCAGCAAGAACACGGCG-AGAGTAGATGTT 724374 Query 80391 TGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGG 80450 | ||||||||||| || |||||| || || ||||| ||||| || || || Sbjct 724373 CGAGGTGTAAGGCTCGAAACATTCGTTGAAGCCCAGAATCTGGCTGGTGCTTGCAGTGGG 724314 Query 80451 CATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATC 80510 ||| || | ||||||| || |||| |||| || | ||| |||| || Sbjct 724313 CATTGGTGCCACCAACAAACTGTTGCGCACACCGTTCT--GGGCAATCTTCGC---CTTC 724259 Query 80511 TGACCAAAAATCAACCCCAACG--CTGTG--------ACCCCACATGTCGTGCTGCAAGA 80560 || | | || |||| | | ||| |||||||||| | ||| | || Sbjct 724258 AGAGC--ATCCCAGTCCCAGAGGTCCGTGGGGGTTCTGTCCCACATGTCATACTGGAGGA 724201 Query 80561 TGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCT 80620 | || | || | ||||| ||| || | ||||| || || || | ||||||||||| Sbjct 724200 TACCTTGAGAGACGGGAGAGCCCTCGTAGGTCTCATAAGGACCAAACTCCTTGGCCAGCT 724141 Query 80621 CACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGC 80680 |||| || | | || || ||||||| ||| |||||||| |||| | | Sbjct 724140 CACAAGAAGCAGTCAGAGCACCGTGATAGATGGTCTCAAAGATCTGGATGTTTAGCTGTC 724081 Query 80681 GCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAA 80740 |||| | |||||| | || | || | ||| | || ||||| || | | Sbjct 724080 TGGCCTCGGCAGAGTCGAATGGCAGACGCAGGGCAAGGAAGGCATCGGCCAGACCATTGA 724021 Query 80741 CGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATC-GCTCGGCCTCCGGAATTGGGTAA 80799 | || | || || ||||| |||||| |||| | || || |||||| |||| |||||| Sbjct 724020 CACCAAGAGCAATGGGGCGATGGCGCATGTT-GCTCTTCTTGGCCTCGGGAACAGGGTAA 723962 Query 80800 AAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTG--TAACATCATGAA 80857 |||| | ||||| | ||||| ||||| | | ||| | || ||| || || | Sbjct 723961 TAGTTGATGTCGATAATCTTGTTCAAGTTGC--GAACCAAGACTTGCACAACCTCGTGCA 723904 Query 80858 GTTTCTGAAAGTCGAATT------GGTTCCCCTTCACAAATGCCGGAAGGCTCAGGGACG 80911 | || ||||| ||| || | | || || | ||||| || || | Sbjct 723903 GCTTGCCGAAGTCATATTCTCCACGGGCGGCGTCGACGAAGGTAGGAAGCGCGAGAGAAG 723844 Query 80912 CCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAAT 80971 |||| ||||| || || || || |||| | | | |||| | ||| |||||||| | || Sbjct 723843 CCAGGTTGCAGACAGCAACTTCGTCAGGAGCACTGTACTCAATGATCTCCGTGCAAAGAT 723784 Query 80972 TAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGT 81031 | || ||| || |||||||| |||||||| ||| |||||| || ||||||| Sbjct 723783 TGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGT 723724 Query 81032 AGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGC 81091 | ||| | ||| | || |||||| ||| | || || || || | ||| | || Sbjct 723723 AAAGCATAAAGGGGTTGCCAGTCTCGGTCTGAGCCTCAAGAATAGCATACCAGAGCTTTT 723664 Query 81092 GCGCCTTGA 81100 | ||||||| Sbjct 723663 GAGCCTTGA 723655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570303064382480