Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq38 122 5e-23
>seq38
Length=883156
Score = 122 bits (134), Expect = 5e-23
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| ||||| ||||||||||||||||| |||||||| ||||| || || || | |
Sbjct 700935 AGACGCAGCACCAGGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCGGAGAGGGTCCTC 700994
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| | || ||||| || || || | |||||| ||||| || || | |||||||
Sbjct 700995 CCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGGGGAATTCCCTCC 701054
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| |||| || | || ||| | ||||| || | ||| || |||| ||
Sbjct 701055 TTGTCTTGGATC-TTGCTCTTCACGTTGTCGATTGTATCAGAGGACTCAACCTCCAGTGT 701113
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||| | || || || || ||||||||
Sbjct 701114 AATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 701152
Score = 86.0 bits (94), Expect = 4e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | || | ||| || ||| |||||||||||||| ||||| || | || ||
Sbjct 701163 AGACGGAGGACAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAGACAAGGTACGA 701222
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||||||||| || || ||||| || | ||||||||| || || || | ||||||
Sbjct 701223 CCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAGGAATACCCTCC 701282
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|| || ||| || | || || | || |||||| ||| ||||| | ||
Sbjct 701283 TTATC-CTGAATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCTAATGT 701341
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||| | || ||||| ||||| |||||
Sbjct 701342 GATAGTCTTTCCGGTAAGAGTCTTCACGAAAATTTGCAT 701380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314725652995757
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |