Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq38 140 8e-28
seq160 122 2e-22
seq65 98.7 2e-15
seq663 84.2 5e-11
>seq38
Length=883156
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||| || || ||||| || ||||| ||||| ||||| | | ||| | ||||||
Sbjct 701169 AGGACAAGATGCAGTGTGGATTCCTTTTGAATGTTGTAATCAGACAAGGTACGACCATCT 701228
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || ||||| || || ||||| || || ||||| || ||||||| || ||||| |||
Sbjct 701229 TCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCGGGAGGAATACCCTCCTTATCC 701288
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || || || ||||||||||| || || || || | ||||| |||
Sbjct 701289 TGAATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCTAATGTGATAGTC 701348
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || |||||||| || || | |||||
Sbjct 701349 TTTCCGGTAAGAGTCTTCACGAAAATTTGCAT 701380
Score = 134 bits (148), Expect = 3e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||||||||| || || ||||| ||||| || || | | || | || ||
Sbjct 701397 AGGACGAGGTGAAGAGTCGATTCCTTTTGAATGTTGTAGTCGGACAAAGTGCGGCCGTCC 701456
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || ||||| || ||||| || ||||||||||| | || ||||| |||
Sbjct 701457 TCCAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCC 701516
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || || || || || ||||| | || ||||| | ||||| |||
Sbjct 701517 TGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTC 701576
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| |||||||||||||| || || | |||||
Sbjct 701577 TTGCCCGTGAGAGTCTTGACGAAGATTTGCAT 701608
>seq160
Length=150305
Score = 122 bits (134), Expect = 2e-22
Identities = 137/182 (75%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || ||||| | ||||| || |||||||| || ||||||||
Sbjct 102198 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 102139
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| || |||||||| || | || ||||||||||||||||| || || || |||
Sbjct 102138 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 102079
Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103
|||||||| ||| ||||| ||||| || || ||||| ||||| || ||||| ||
Sbjct 102078 ATGGTGTC---GCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 102022
Query 211104 AA 211105
||
Sbjct 102021 AA 102020
>seq65
Length=534987
Score = 98.7 bits (108), Expect = 2e-15
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || || ||||| || |||||||| || || | |||||| | || ||
Sbjct 174137 AGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTACGGCCGTCC 174196
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| ||||||||||| |||||||| || || || ||||| || |||| ||| ||||||||
Sbjct 174197 TCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTGTC 174255
>seq663
Length=274
Score = 84.2 bits (92), Expect = 5e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || ||||| || || || || || || |||||||| || | || ||
Sbjct 146 ACGAAGACGGAGAACCAGGTGCAGGGTAGATTCCTTCTGAATGTTATAGTCGGAGAGAGT 205
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || ||||||||||| ||||| || | ||| || ||||||||||| | ||
Sbjct 206 GCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATGCC 265
Query 211013 TTCCTTGTC 211021
||||| ||
Sbjct 266 CTCCTTATC 274
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159136717667585
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |