Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq40 205 1e-47 seq27 93.3 6e-14 >seq40 Length=974685 Score = 205 bits (226), Expect = 1e-47 Identities = 588/897 (66%), Gaps = 8/897 (1%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||| || || || |||||||| ||| ||||| |||||| ||||| | || | | Sbjct 723553 TCAAACTCGTCGCCATAAACATCAGCCAGGCCAGGGGCTTCATTGGGACAGAACAGAGTC 723494 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || || || | || ||| || ||||| || |||||||| |||| ||||| || Sbjct 723493 CAGTCGCCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGAGCGTAGAAC 723434 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 ||||| |||| ||| ||| || || || |||||| |||||| | |||||| | Sbjct 723433 AGATCACGGGCTCTGACTTCCTCCTTACCGTGATTCTTGCGAAGATCCAAGAACTCAAAG 723374 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | ||| | ||||| || || || || || || | | | || || || || || |||||| Sbjct 723373 ACATCGGCGTGCCAAGGCTCGAGGTAAATAGCGAAAGCGCCAGGGCGCTTGTTTCCTCCC 723314 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | ||||||||||||||| || | || | | ||| |||| ||| |||||||| Sbjct 723313 TGGTCGACATATCTGGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAA 723254 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 | ||| || || ||| ||| || || ||||| || || || || Sbjct 723253 GAACCGTTGGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGACCG 723194 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || || | || ||||| | ||||| || | ||||| ||||| || || Sbjct 723193 ATACCACCGGCGGTCTTCGAGATCATGGCACAAGTCTTGAGAGTGTCGTAGATACCTTCA 723134 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999 || ||||| ||| |||| | | || || || | || || | || ||| || Sbjct 723133 ATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCCAGCTGGGGCTGGGGAGTCCCA 723074 Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059 ||||| |||| ||||||||| ||||||||||| |||| | || | |||| ||| || Sbjct 723073 GCATTGAACAGTGTAGGAGACGCATGAGTGAAGTATTTCTGGGACATGAGATGGTAGGTC 723014 Query 77060 TCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGC 77119 ||||| | ||| || | ||||| || || || ||||||||||||| ||| Sbjct 723013 TCAATGGCCTTTTCAATGTTGTTACCGTGAATACCGACGGCAACACGCATCAACAAGTGC 722954 Query 77120 TGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTA 77179 || || || || || ||| || ||| || || ||| || || | || || Sbjct 722953 TGGGGACGCTCAGCAACCTTGCCGTTGATTCGCAGCAGGTAGGAACGCTCAAGTGTCTTG 722894 Query 77180 AAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCC 77239 || || ||| ||||||| ||||| | ||||| | |||| | || || || | || Sbjct 722893 AAGCCGAAAAAGTTGTAGTTGAAGTCACGATCGTATACAATAGCAGAGTTGAGCTCATCG 722834 Query 77240 TTATATTTGGTAACAATATC-CATGACAGTGGTAGAAATAATTGGAGATCGTATTCC--A 77296 || ||| | ||||| || | | | | | || || ||||| | || || | Sbjct 722833 GCATGTTTCATGACAATTTCATACGTCTCT-TTCGATATCATTGGCG--CGGGTTGCTTG 722777 Query 77297 TTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTA-AATAGtttttttGT 77355 || || || || ||||||| || | ||| || || || | || | || || || Sbjct 722776 TTCTTGGGGTTGACATAGTGGAAGAGATCTGAGATGAC-CAGCGAGAACTGCTTCTTGGT 722718 Query 77356 TTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412 || |||||| || || || |||||||| | |||||||| || ||||| || || || Sbjct 722717 TTGCTTGTGGAGGTTGGAAACGGCTATACGGGCAGCTAGGATGGCATAATCGGGGTG 722661 >seq27 Length=857455 Score = 93.3 bits (102), Expect = 6e-14 Identities = 291/452 (64%), Gaps = 24/452 (5%) Strand=Plus/Plus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 || ||||| ||||| ||||| ||||| || || || || || ||| | | || ||| | Sbjct 682357 TTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTGGTCTTTCCTGCAAGAGAGATACTC 682416 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| || || || || || | | || || || || ||| | | | | Sbjct 682417 TCCATGAAGTCGAAGGGGTTTGGAGAGTTGTAGTACTTCTTGTTTCCGAGGGCGACCAAC 682476 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 || | || |||||||| || || ||| ||||| | | | ||||| || | ||| Sbjct 682477 AGCCGGTCAGCAACGAACTCAATGTACTGGCACATCAGCTTAGAGTTCATGCCCAGGAGG 682536 Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578 ||| || ||||| || || | ||||| ||||| || | ||||| || | | Sbjct 682537 CCGACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCGATGGCCACAGCCTC-------AAC 682589 Query 46579 GATGTTACTGTTTCCTCA--------CTTGGTGG----ATGCATCAAATGTTTAAACATT 46626 |||| || |||||| |||| || ||| | || || |||| Sbjct 682590 GATGATA-----TCCTCAACAACCTTCTTGTCGGGGCGATGGTTTAAGTGCGAGAACAGA 682644 Query 46627 AAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 46686 | || ||||| ||| || || || || || | | || | ||||| || || ||| Sbjct 682645 AGGCAGGCAAAGTCAGTGTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTG 682704 Query 46687 AGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAG 46746 || || ||||| | ||||||||| || ||||| || || | || ||||||||||| ||| Sbjct 682705 AGACCCGGCATCAATCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAG 682764 Query 46747 AATATGCCTTCTACAGCCGCGAATGCGACAAG 46778 || || || || ||||| ||||| || ||||| Sbjct 682765 AAGATTCCCTCCACAGCAGCGAAGGCCACAAG 682796 Score = 87.8 bits (96), Expect = 3e-12 Identities = 174/257 (68%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986 || ||||||||||| ||||| ||||| || ||||| || || | || |||| | | Sbjct 682998 TCCGAATGAATGTTCTCAATCATGATCTGGAAGCCGTAGAAGCACCGAGCCTCAGGCACC 683057 Query 46987 TGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCA 47046 || ||||| | | || || || || |||||||| || ||||| ||| ||||| Sbjct 683058 TGCACCTCATTGCTGAAACGCTCCAGCAGGTTCTCATTGACGATTCCGTCAGAGGCAGCG 683117 Query 47047 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA---GTTTATTCCAG 47103 || || || | ||||| || || || |||||| | | | | || |||||| Sbjct 683118 AAGAAGGCAAGGACATGAGAGATGAAGTAACGCTCATCGTCATTTAGGCGGTTGTTCCAG 683177 Query 47104 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTT 47163 || | | |||||| || | ||| | || || || |||||||| || || || ||||| Sbjct 683178 TCGTGCAGATCTTTAGAGAGATCAATCTCCTCGGCGGTCCAGAAGGAAGCTTCGGCTTTC 683237 Query 47164 TTATACATATTCCATAT 47180 || ||||| | ||| || Sbjct 683238 TTGTACATTTGCCAAAT 683254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712925229881280