Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24]
1,029 sequences; 32,185,562 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq38 154 4e-32
seq160 105 2e-17
>seq38
Length=883156
Score = 154 bits (170), Expect = 4e-32
Identities = 160/207 (77%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||||||||| ||||| || ||||| || ||||| | || || || ||||||
Sbjct 701377 CAAATTTTCGTGAAGACTCTTACCGGAAAGACTATCACATTAGAAGTCGAGTCTTCAGAC 701318
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||||||||| || || || || ||||| || || ||
Sbjct 701317 ACCATCGACAATGTCAAGAGCAAGATTCAGGATAAGGAGGGTATTCCTCCCGATCAACAG 701258
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC-GATTATAACGT 178102
|| || ||||| || ||||| || || |||||||| | || |||| | ||||| ||| |
Sbjct 701257 CGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGTCGTAC-CTTGTCTGATTACAACAT 701199
Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129
||||| ||||| ||||||||||||||
Sbjct 701198 TCAAAAGGAATCCACACTGCATCTTGT 701172
Score = 123 bits (136), Expect = 6e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || |||||||| || || || |||||| | ||||| || | |||
Sbjct 701605 CAAATCTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGCGAC 701546
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| ||||||||||| || || || |||||||| ||||||||
Sbjct 701545 ACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAGCAG 701486
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||| || || ||||| || || || | ||| | |||| || ||| |
Sbjct 701485 CGCCTGATTTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACTTTGTCCGACTACAACATT 701426
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||| ||||| || || || || ||
Sbjct 701425 CAAAAGGAATCGACTCTTCACCTCGT 701400
>seq160
Length=150305
Score = 105 bits (116), Expect = 2e-17
Identities = 134/183 (73%), Gaps = 6/183 (3%)
Strand=Plus/Plus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985
|||||| || || || || || || || || |||||||| || || ||| |||||
Sbjct 102019 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGC---GACAC 102075
Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045
|||||| || ||||| ||||| |||||||| || || ||||| || |||||||| ||
Sbjct 102076 CATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCG 102135
Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105
|| |||||||| || || ||||| || ||||| | || || ||| || ||| ||||
Sbjct 102136 CCTGATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 102195
Query 178106 AAA 178108
||
Sbjct 102196 GAA 102198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203715329932626
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |