Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20udagawae_20[genbank_20GCA_5F001078395.1_202015-06-24] 1,029 sequences; 32,185,562 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq38 154 4e-32 seq160 105 2e-17 >seq38 Length=883156 Score = 154 bits (170), Expect = 4e-32 Identities = 160/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||||||||| ||||| || ||||| || ||||| | || || || |||||| Sbjct 701377 CAAATTTTCGTGAAGACTCTTACCGGAAAGACTATCACATTAGAAGTCGAGTCTTCAGAC 701318 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||||||||| || || || || ||||| || || || Sbjct 701317 ACCATCGACAATGTCAAGAGCAAGATTCAGGATAAGGAGGGTATTCCTCCCGATCAACAG 701258 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC-GATTATAACGT 178102 || || ||||| || ||||| || || |||||||| | || |||| | ||||| ||| | Sbjct 701257 CGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGTCGTAC-CTTGTCTGATTACAACAT 701199 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 ||||| ||||| |||||||||||||| Sbjct 701198 TCAAAAGGAATCCACACTGCATCTTGT 701172 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || |||||||| || || || |||||| | ||||| || | ||| Sbjct 701605 CAAATCTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGCGAC 701546 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| ||||||||||| || || || |||||||| |||||||| Sbjct 701545 ACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAGCAG 701486 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || || ||||| || || || | ||| | |||| || ||| | Sbjct 701485 CGCCTGATTTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACTTTGTCCGACTACAACATT 701426 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| ||||| || || || || || Sbjct 701425 CAAAAGGAATCGACTCTTCACCTCGT 701400 >seq160 Length=150305 Score = 105 bits (116), Expect = 2e-17 Identities = 134/183 (73%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 102019 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGC---GACAC 102075 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| || ||||| ||||| |||||||| || || ||||| || |||||||| || Sbjct 102076 CATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCG 102135 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || |||||||| || || ||||| || ||||| | || || ||| || ||| |||| Sbjct 102136 CCTGATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 102195 Query 178106 AAA 178108 || Sbjct 102196 GAA 102198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203715329932626