Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ustus_20[genbank_20GCA_5F000812125.1_202014-12-31] 770 sequences; 38,351,268 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq549 199 5e-46 seq107 84.2 3e-11 >seq549 Length=441068 Score = 199 bits (220), Expect = 5e-46 Identities = 592/903 (66%), Gaps = 20/903 (2%) Strand=Plus/Plus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 ||||||||||| || | || | |||| | |||| |||| || || | | | | Sbjct 59805 TCGAACTCGTCGCCATAGACGTCTGCCAAGCCAGGAGCCTCATTGGGGCAGAAGAGGGTC 59864 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63307 || || |||| | ||| || || ||||| || ||||| || |||| ||||| ||| || Sbjct 59865 CAATCACCGTTAGCCTCGACCCGCTTCATGAACAGATCGGGGGTCCACAGAGC-ATAGAA 59923 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 || || | | ||| |||||| ||||| ||||| ||||| | |||| | | Sbjct 59924 CAGGTCACGAGCTCTGACTTCCTCCTTTCCGTGGTTCTTACGCAGATCCAAGAACTCAAA 59983 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 || ||||| |||||| || || | ||| || || | | | || || || ||||||||||| Sbjct 59984 AACATCAGCATGCCAGGGCTCAAGGTAGATCGCAAAAGCACCTGGACGCTTGTTTCCTCC 60043 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 ||| || | ||||| ||||||||| || | |||| | ||| |||| ||| ||||| || Sbjct 60044 CTGGTCAACGTATCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAAGAATTCCGTTGGA 60103 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATA--TTACTAATTGATAGA 63545 | || |||||||| ||| || ||| | ||||| ||| | ||| ||| Sbjct 60104 TGATCCGTTGGTACCACTGATGTAAGAGCCAGTAGCACGGATACGGTGGACGTTG--AGA 60161 Query 63546 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTGTCATAGATGCC 63604 || || || || || | || || || | || || ||| || || ||||| ||||| || Sbjct 60162 CCGATACCACCAGCAGTCTTTGAAATCATAGCACA-CGTCTTCAATGTGTCGTAGATACC 60220 Query 63605 TTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGT 63664 || || || || || |||| | | || || ||| || || || | | | ||| Sbjct 60221 CTCGATACTGTCCTCCTTCATATCGACCAGGAAGCAGGAAGCCAGCTGAGGCTGGGGAGT 60280 Query 63665 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 63724 |||||||| || | || || || ||||| || || | || | || | || ||||| Sbjct 60281 ACCCGCATTGAACAGAGTGGGGGAGGCGTGTGTGAAGAACTTCTGGGACATCAGGTTGTA 60340 Query 63725 CGTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAAC 63782 |||||||| ||| ||| || ||||| ||||| || || || |||||||| | | Sbjct 60341 GGTCTCAATCGCT--CTCTCGATGTCATTGCCGTGAATACCGACGGCAACACGCATCAGC 60398 Query 63783 ATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63842 | ||||| || | || ||| ||| || | || | ||| || || | | Sbjct 60399 AGTTGCTGGGGACGCTCGGCAACCTTGCCATTGAGACGCAGAAGGTACGAGCGCTCAAGA 60458 Query 63843 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGC 63902 ||||| |||||||| ||||||| ||| ||||| ||||||| || | ||||| || Sbjct 60459 GTTTTGAAACCAAAGAAGTTGTAGTTAAAATCTCGATCGTAAACGATGGCGGAATTAAGT 60518 Query 63903 TTATCCTTATATTTGTTAACTATATCCATGGTAATACT----TGAAATAATCGGAGAATG 63958 | ||| || ||| | || || || ||| || ||| || || || | | | Sbjct 60519 TCATCGGCATGTTTCATCACGATCTC----GTACGTCTCTTGTGATATCATAGGCGCAGG 60574 Query 63959 TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 64018 ||| || || || || ||||||| | | | || || || ||| | || Sbjct 60575 CTTCTTGTTCTTGGGGTTGACATAGTGGTAGAGGTCTGAGATAACGAGGGAGAATTGCTT 60634 Query 64019 ttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGG 64078 ||||||| |||||| || || || | ||| || | ||||| || |||||||| || || Sbjct 60635 CTTTGTTTGCTTGTGGAGGTTCGACACGGCAATACGAGCGGCAAGGATGGCATAGTCAGG 60694 Query 64079 ATG 64081 || Sbjct 60695 GTG 60697 >seq107 Length=114770 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637 || ||| || ||||| ||| ||||||||||| | || | || || || || || Sbjct 97013 CAGACAGGCAAAATCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCATTGGAGAAGGT 96954 Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697 ||| || ||||| || |||||||| || ||||| || || ||||| || || || || || Sbjct 96953 GAGGCCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATAGAAGCAAAGGAGCCAGAGAA 96894 Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAA 33726 ||| || || || || ||||| || |||| Sbjct 96893 GAAAATACCCTCGACGGCAGCGAATGCAA 96865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629811538005600