Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ustus_20[genbank_20GCA_5F000812125.1_202014-12-31] 770 sequences; 38,351,268 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq549 208 1e-48 >seq549 Length=441068 Score = 208 bits (230), Expect = 1e-48 Identities = 591/899 (66%), Gaps = 12/899 (1%) Strand=Plus/Plus Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003 ||||||||||| || | | | | || |||||| ||||| || || | | | | Sbjct 59805 TCGAACTCGTCGCCATAGACGTCTGCCAAGCCAGGAGCCTCATTGGGGCAGAAGAGGGTC 59864 Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 72062 || || || | | | | || || ||||| || ||||| || |||| ||||| ||| || Sbjct 59865 CAATCACCGTTAGCCTCGACCCGCTTCATGAACAGATCGGGGGTCCACAGAGC-ATAGAA 59923 Query 72063 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 72122 || || | | ||| ||||| ||||| ||||| ||||| | |||| | | Sbjct 59924 CAGGTCACGAGCTCTGACTTCCTCCTTTCCGTGGTTCTTACGCAGATCCAAGAACTCAAA 59983 Query 72123 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCC 72182 || ||||| |||||| || || | ||| || || | | | || || || ||||||||||| Sbjct 59984 AACATCAGCATGCCAGGGCTCAAGGTAGATCGCAAAAGCACCTGGACGCTTGTTTCCTCC 60043 Query 72183 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 72242 ||| || | ||||| ||||||||| || | |||| | ||| |||| ||| || ||||| Sbjct 60044 CTGGTCAACGTATCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAAGAATTCCGTTGGA 60103 Query 72243 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA--TTGCTAATTGATAGA 72300 || || ||||| || ||| || ||| | ||||| ||| || ||| ||| Sbjct 60104 TGATCCGTTGGTACCACTGATGTAAGAGCCAGTAGCACGGATACGGTGGACGTTG--AGA 60161 Query 72301 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCC 72359 || || || || || | || || || | || || ||| || || || || ||||| || Sbjct 60162 CCGATACCACCAGCAGTCTTTGAAATCATAGCACA-CGTCTTCAATGTGTCGTAGATACC 60220 Query 72360 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 72419 ||| ||||| || ||| |||| | | || || ||| || || || | | ||| Sbjct 60221 CTCGATACTGTCCTCCTTCATATCGACCAGGAAGCAGGAAGCCAGCTGAGGCTGGGGAGT 60280 Query 72420 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTA 72479 |||||||| || | || || || ||||| || || | || | |||| || ||||| Sbjct 60281 ACCCGCATTGAACAGAGTGGGGGAGGCGTGTGTGAAGAACTTCTGGGACATCAGGTTGTA 60340 Query 72480 CGTCTCAATAGCTGATTCTATATCCCATTG--ATGTATTCCTACCGCGACACGCATTAAC 72537 |||||||| ||| ||| || ||||| || || || || || |||||||| | | Sbjct 60341 GGTCTCAATCGCT--CTCTCGATGTCATTGCCGTGAATACCGACGGCAACACGCATCAGC 60398 Query 72538 ATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAA 72597 | ||||| || | || | | |||| ||| | || | ||| || || | | Sbjct 60399 AGTTGCTGGGGACGCTCGGCAACCTTGCCATTGAGACGCAGAAGGTACGAGCGCTCAAGA 60458 Query 72598 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGT 72657 ||||| |||||||| ||||||| ||| ||||| ||||||| || | ||||| ||| Sbjct 60459 GTTTTGAAACCAAAGAAGTTGTAGTTAAAATCTCGATCGTAAACGATGGCGGAATTAAGT 60518 Query 72658 TTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTC 72717 | ||| || ||| | || || || || ||| || || || | | | ||| Sbjct 60519 TCATCGGCATGTTTCATCACGATCTCGTACGTCTCTTGTGATATCATAGGCGCAGGCTTC 60578 Query 72718 CCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 72777 || || || || ||||||| | | | || || || ||| | || ||| Sbjct 60579 TTGTTCTTGGGGTTGACATAGTGGTAGAGGTCTGAGATAACGAGGGAGAATTGCTTCTTT 60638 Query 72778 GTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 |||| |||||| || || || ||||| || | ||||| || |||||||| || || || Sbjct 60639 GTTTGCTTGTGGAGGTTCGACACGGCAATACGAGCGGCAAGGATGGCATAGTCAGGGTG 60697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671132740285200