Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ustus_20[genbank_20GCA_5F000812125.1_202014-12-31] 770 sequences; 38,351,268 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq155 82.4 5e-11 >seq155 Length=372478 Score = 82.4 bits (90), Expect = 5e-11 Identities = 133/185 (72%), Gaps = 6/185 (3%) Strand=Plus/Plus Query 44363 AAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCG 44422 ||| | ||||||||| | ||||||| ||| | |||| |||| || ||||||||||| Sbjct 181728 AAGTTTGTCAAGGTGCGCATGAGGACAACCAAGGTCCCACAGATCGGTGACAAGTTTGCC 181787 Query 44423 TC-GTTCACGGCGCAAAAGGGGACATGCGG-AGC-CGTCCTGACCCAGGAGGACATGCCC 44479 || |||||| |||||||| ||| ||| | | ||| | | |||||| |||||||| Sbjct 181788 TCTCGTCACGG-TCAAAAGGGTACAATCGGTATCACGTACCG--CCAGGAAGACATGCCT 181844 Query 44480 TTCGACAAAAACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGG 44539 || | || || ||| || || |||||||||||||||||| |||| || | Sbjct 181845 TTTACTCGCGAGGGTGTCACGCCTGATCTTATCATCAACCCCCACGCCATTCCGTCGCGT 181904 Query 44540 ATGAC 44544 ||||| Sbjct 181905 ATGAC 181909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340134408021210