Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ustus_20[genbank_20GCA_5F000812125.1_202014-12-31] 770 sequences; 38,351,268 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq104 174 2e-39 seq24 174 2e-39 >seq104 Length=295945 Score = 174 bits (192), Expect = 2e-39 Identities = 201/268 (75%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || || | ||||| | || || |||||||| || ||||||||||| |||| Sbjct 225244 CGCCAAGCGCCACCGTAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTA 225302 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| || || ||||| || ||||||||| | || | || |||| ||||||| Sbjct 225303 TCCGCCGTCTTGCCCGCCGTGGCGGTGTCAAGCGTATTTCCGCCATGATCTACGAAGAGA 225362 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | |||| | ||| ||||||| || |||| |||| ||| ||| || ||| |||| Sbjct 225363 CCCGCGGTGTTCTCAAGTCCTTCCTCGAGTCCGTCATCCGTGACGCTGTCACCTACACCG 225422 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 |||||||||| || ||||| ||||||||| | || | ||||| || | || || || | Sbjct 225423 AGCACGCTAAGCGCAAGACCGTCACCTCCCTTGACGTTGTCTACGCCCTCAAGCGCCAGG 225482 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698 |||| | | || ||||| || |||| Sbjct 225483 GCCGCACCCTCTACGGTTTCGGTGGTTA 225510 >seq24 Length=660863 Score = 174 bits (192), Expect = 2e-39 Identities = 189/248 (76%), Gaps = 2/248 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || |||||||| || ||||| ||||| |||| Sbjct 549000 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACTAAGCCCGCTA 548942 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| || || |||||||| || |||||| |||| | || |||| || |||| Sbjct 548941 TCCGTCGTCTTGCCCGCCGTGGTGGTGTTAAGCGTATCTCCGCCATGATCTACGAGGAGA 548882 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| ||| | |||| ||||||| || || |||| ||| || || ||| || | Sbjct 548881 CCCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCCGTCACCTACACTG 548822 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||||||||| || | ||| ||||||| || | || ||||||| Sbjct 548821 AGCACGCCAAGCGCAAGACTGTCACTTCTCTCGATGTCGTCTACGCTCTCAAGCGTCAAG 548762 Query 16671 GCCGTAAG 16678 | ||| || Sbjct 548761 GACGTGAG 548754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074495983610