Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ustus_20[genbank_20GCA_5F000812125.1_202014-12-31] 770 sequences; 38,351,268 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq46 134 3e-26 seq131 100 7e-16 seq205 86.0 1e-11 >seq46 Length=358866 Score = 134 bits (148), Expect = 3e-26 Identities = 171/233 (73%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||||| || || ||||| || ||||| | | Sbjct 220423 CCACCACGAAGGCGCAGGACCAGGTGGAGTGTGCTCTCCTTCTGGATGTTGTAGTCAGAG 220482 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || || |||||||||||||| || || || |||||||| || ||||| || ||| Sbjct 220483 AGGGTACGTCCGTCTTCTAACTGCTTGCCAGCGAAGATAAGGCGCTGCTG---GTCTGGG 220539 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||||||||||| || || || || || | || || || || |||| || |||| Sbjct 220540 GGGATTCCTTCCTTGTCTTGAATCTTAGTCTTGACATTATCGATAGTGTCGGAGCTC--- 220596 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||||||||||||| || || ||||||||||| |||||||| Sbjct 220597 TCAACCTCCAACGTGATCGTCTTCCCAGTGAGTGTCTTGACGAAAATCTGCAT 220649 Score = 102 bits (112), Expect = 2e-16 Identities = 147/206 (71%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| |||| ||| ||| || || ||||| ||||| | Sbjct 221207 CCACCACGCAGGCGGAGAACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAGTCAGAC 221266 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || || || | || || || ||||| ||||| || ||||| |||||| Sbjct 221267 AAGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAGGCGTTGTTGG---TCTGGG 221323 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || ||||||||||| || | || ||||| || || | |||||| || || Sbjct 221324 GGGATGCCCTCCTTATCCTGGATCTTGGTCTTAACGTTATCGATGGTATCGCTAGACTCG 221383 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGT 288449 || ||||| ||||| ||||| || || Sbjct 221384 ACCTCGAGAGTGATGGTCTTGCCAGT 221409 >seq131 Length=307418 Score = 100 bits (110), Expect = 7e-16 Identities = 132/182 (73%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || || || || || || | || || || ||||||||| Sbjct 238038 TTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 237979 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||| || || ||| || || || || |||||||| || | || ||||| Sbjct 237978 AGGCGCTGCTGG---TCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG 237922 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | |||||||| || || ||||| || || ||||| || ||||| ||||||||| Sbjct 237921 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 237862 Query 288463 AA 288464 || Sbjct 237861 AA 237860 >seq205 Length=1033815 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | ||||| || || ||||| || ||||||| | Sbjct 905692 CCACCACGCAGACGCAGGACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 905751 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTG 288356 || ||||| ||||| || | || ||||| ||||||||||||||||| || Sbjct 905752 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTG 905801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179642761972060