Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ustus_20[genbank_20GCA_5F000812125.1_202014-12-31] 770 sequences; 38,351,268 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq46 96.9 4e-15 seq131 91.5 2e-13 seq205 87.8 2e-12 >seq46 Length=358866 Score = 96.9 bits (106), Expect = 4e-15 Identities = 155/219 (71%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 |||| |||| || | |||||||||||| || || ||||| |||| || || || || Sbjct 220435 CGCAGGACCAGGTGGAGTGTGCTCTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGTCCG 220494 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || |||| |||||| |||||||| || || ||||||||||| | || | | |||||| Sbjct 220495 TCTTCTAACTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCTGGGGGGATTCCTTCCTTG 220554 Query 42114 TCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 42169 | | ||| | || || |||| | | | ||||| |||| || || || | ||| Sbjct 220555 T-CTTGAATCTTAGTCTTGACATTATCGATAGTGTCGGAGCTC---TCAACCTCCAACGT 220610 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || || || || || ||||| || || || ||||| Sbjct 220611 GATCGTCTTCCCAGTGAGTGTCTTGACGAAAATCTGCAT 220649 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/168 (72%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| ||||||||||| |||| || || || | || || |||||||| |||||||| Sbjct 221243 TCCTTCTGAATATTGTAGTCAGACAAGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAA 221302 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG-T 42136 || || || || ||||| | || | || |||||| ||| || | || || | | || | Sbjct 221303 ATCAGGCGTTGTTGGTCTGGGGGGATGCCCTCCTTATCC-TGGATCTTGGTCTTAACGTT 221361 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184 | | || ||||| || || || |||| |||||||| ||||| || Sbjct 221362 ATCGATGGTATCGCTAGACTCGACCTCGAGAGTGATGGTCTTGCCAGT 221409 >seq131 Length=307418 Score = 91.5 bits (100), Expect = 2e-13 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || || ||||| || ||| || || | || || |||||||| || ||||| | Sbjct 238040 CCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 237981 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | || ||||||||||| | || | | |||||||||| ||| || |||| ||| | Sbjct 237980 TCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 237922 Query 42139 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 237921 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 237862 Query 42198 AA 42199 || Sbjct 237861 AA 237860 >seq205 Length=1033815 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| || | |||| ||||||||||| || || ||||| || | || || || | Sbjct 905703 ACGCAGGACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 905762 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || |||||||| || ||||| || || ||||||||||||| ||| | | |||||| Sbjct 905763 GTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCGGGTGGGATACCCTCCTT 905822 Query 42113 GTC 42115 ||| Sbjct 905823 GTC 905825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543207571576800