Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ustus_20[genbank_20GCA_5F000812125.1_202014-12-31] 770 sequences; 38,351,268 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq46 96.9 2e-15 >seq46 Length=358866 Score = 96.9 bits (106), Expect = 2e-15 Identities = 143/198 (72%), Gaps = 10/198 (5%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||||||||| |||||||| || | || |||| || ||||| |||||||| || Sbjct 220686 TTCCTTCTGAATGTTGTAGTCCGAGAGTGTGCGACCATCCTCAAGCTGCTTTCCGGCGAA 220745 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGT-TTGACGG 34908 || || || ||||| || | || | ||||||||||| |||||| ||| || || Sbjct 220746 GATAAGACGCTGCTGATCCGGAGGAATTCCCTCCTTGTCTTGAATCTT-TGTCTTCAC-- 220802 Query 34909 ATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964 || ||||||| || || ||| || || | ||| || || || || || || ||| Sbjct 220803 AT--TATCGATCGTGTCGGAGGACTCGACCTCCAAGGTAATAGTCTTGCCAGTAAGGGTC 220860 Query 34965 TTCACAAAGATCTGCATA 34982 || ||||| || |||||| Sbjct 220861 TTGACAAAAATTTGCATA 220878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324630553516560