Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ustus_20[genbank_20GCA_5F000812125.1_202014-12-31] 770 sequences; 38,351,268 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq225 113 4e-19 seq46 96.9 3e-14 >seq225 Length=75473 Score = 113 bits (124), Expect = 4e-19 Identities = 383/593 (65%), Gaps = 4/593 (1%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||| | ||||| ||| | |||||||| || ||| || ||| | | | ||| Sbjct 52621 GCTGTCGGTATCGATCTTGGAACCACCTACTCTTGCGTGGGTATCTTCCGGGATGACCGC 52562 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 |||| || |||||||| || || |||||| | || || || || | || | ||||| Sbjct 52561 ATTGATATCATTGCCAACGACCAGGGTAACCGCACCACCCCTTCCTTCGTGGCCTTCACC 52502 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | ||| | |||||||| || | | || | | | || ||| ||| Sbjct 52501 GACACCGAGCGTTTGATCGGTGATGCCGCCAGGAACCAGGTCGCCATGAACCCTCACAAC 52442 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 ||| | || |||||||| ||| | || || | ||||| ||| | |||||||| Sbjct 52441 ACTGTCTTCGATGCTAAGCGTCTGATCGGTCGTCGTTTTGCCGATGCTGAGGTTCAGGCT 52382 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 ||||||||||| ||||| ||| | | || | |||||| || || || | | Sbjct 52381 GATATGAAGCACTGGCCCTTCAAGGTCGTCGACAAAGGTGGAAAGCCCATCATCGAGGTT 52322 Query 550292 -ACTCATGAAGGATCTGTTAAA-CAATTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349 | | | |||| | || || || | || || || | || || ||||| | | Sbjct 52321 GAGT--TCAAGGGCGAGACCAAGCAGTTCACCCCCGAGGAAGTCTCCTCCATGGTCCTTA 52264 Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAA 550409 || ||| | || ||| || || | ||| || | | || || | | Sbjct 52263 CAAAGATGCGTGAGACTGCCGAGGCCTTCCTGGGTGGCACCGTCAACAACGCCGTCGTCA 52204 Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469 | || || || || || || ||||| || ||||| || ||||| |||||||| | |||| Sbjct 52203 CCGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACTAAGGATGCTGGTCTCATTG 52144 Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529 | || || |||||||| ||||||||||| || || |||||||||||| | || || || | Sbjct 52143 CCGGCCTGAATGTTCTCCGTATTATCAACGAGCCCACTGCTGCTGCAATCGCTTACGGCC 52084 Query 550530 TTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 ||||||| | || || | ||||| |||||||| ||| ||| ||| Sbjct 52083 TTGATAAGAAGGTCGAGGGTGAGCGCAATGTCCTCATCTTCGATCTTGGTGGT 52031 >seq46 Length=358866 Score = 96.9 bits (106), Expect = 3e-14 Identities = 156/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 || ||||| || || || || || ||| || ||| ||||| || | || || | Sbjct 220660 AGGCGGAGGACGAGGTGGAGTGTCGATTCCTTCTGAATGTTGTAGTCCGAGAGTGTGCGA 220719 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||| ||||| || |||||||| || ||||| | |||||||| ||||||||||| || Sbjct 220720 CCATCCTCAAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGATCCGGAGGAATTCCCTCC 220779 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT--ACATTCGAGAG 563434 || |||||||| ||| || || || || || || | | || | || | | || | Sbjct 220780 TTGTCTTGAATCTTTGTCTTCACATTATCGATCGTGTCGGAG-GACTCGACCTCCAAG-G 220837 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||| ||| || |||||||| || || || |||||||||||| Sbjct 220838 TAATAGTCTTGCCAGTAAGGGTCTTGACAAAAATTTGCATA 220878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029255278927300