Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ustus_20[genbank_20GCA_5F000812125.1_202014-12-31] 770 sequences; 38,351,268 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq155 87.8 1e-12 >seq155 Length=372478 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/187 (73%), Gaps = 8/187 (4%) Strand=Plus/Plus Query 52010 GAAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGC 52069 |||| | ||||||||| | ||||||| ||| | |||| |||| || ||||||||||| Sbjct 181727 GAAGTTTGTCAAGGTGCGCATGAGGACAACCAAGGTCCCACAGATCGGTGACAAGTTTGC 181786 Query 52070 GTC-GTTCACGGCGCAAAAGGGGACGTGCGG-AGC-CGTCCTGACCCAGGAGGACATGCC 52126 || |||||| |||||||| || ||| | | ||| | | |||||| |||||| | Sbjct 181787 CTCTCGTCACGG-TCAAAAGGGTACAATCGGTATCACGTACCG--CCAGGAAGACATG-C 181842 Query 52127 CTTCGACAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCATCCA 52185 ||| || | || || || ||| || || |||||||||||||||||| |||| || Sbjct 181843 CTTTTACTCGCGAGGGTGTCACGCCTGATCTTATCATCAACCCCCACGCCATTCCGTCGC 181902 Query 52186 GGATGAC 52192 | ||||| Sbjct 181903 GTATGAC 181909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408613765379210