Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ustus_20[genbank_20GCA_5F000812125.1_202014-12-31] 770 sequences; 38,351,268 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq46 111 1e-18 seq225 87.8 1e-11 >seq46 Length=358866 Score = 111 bits (122), Expect = 1e-18 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| ||||| || || || ||||| ||| || || || || || | || || Sbjct 220656 ACGAAGGCGGAGGACGAGGTGGAGTGTCGATTCCTTCTGAATGTTGTAGTCCGAGAGTGT 220715 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| ||||| |||||||| || || |||||||| || ||||| ||||||||||| Sbjct 220716 GCGACCATCCTCAAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGATCCGGAGGAATTCC 220775 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||||||||||||||| || ||| || || || || | | | | | ||| Sbjct 220776 CTCCTTGTCTTGAATCTTTGTCTTCACATTATCGATCGTGTCGGAGGACTCGACCTCCAA 220835 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||||| || || || || ||||| || |||||||| Sbjct 220836 -GGTAATAGTCTTGCCAGTAAGGGTCTTGACAAAAATTTG 220874 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| || || || || || ||||| || || || | || || |||| || || Sbjct 220428 ACGAAGGCGCAGGACCAGGTGGAGTGTGCTCTCCTTCTGGATGTTGTAGTCAGAGAGGGT 220487 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||||| | ||||| ||||| || ||||| || || || || || || ||||| Sbjct 220488 ACGTCCGTCTTCTAACTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCTGGGGGGATTCC 220547 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 |||||||||||||||||| |||||| || ||||| || | | | | || | ||| Sbjct 220548 TTCCTTGTCTTGAATCTTAGTCTTGACATTATCGATAGTGTCGGAGCTCTCAACCTCCAA 220607 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| ||||| |||||||| || Sbjct 220608 -CGTGATCGTCTTCCCAGTGAGTGTCTTGACGAAAATCTG 220646 >seq225 Length=75473 Score = 87.8 bits (96), Expect = 1e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || || || || || || || || ||||| ||||| || ||||| ||||| || ||| Sbjct 52204 ACCGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACTAAGGATGCTGGTCTCATT 52145 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || || || |||||| | |||||||| || || || || || || ||| | ||||| || Sbjct 52144 GCCGGCCTGAATGTTCTCCGTATTATCAACGAGCCCACTGCTGCTGCAATCGCTTACGGC 52085 Query 474866 CTTGATAAGAA 474876 ||||||||||| Sbjct 52084 CTTGATAAGAA 52074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268146170963960