Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ustus_20[genbank_20GCA_5F000812125.1_202014-12-31] 770 sequences; 38,351,268 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq138 150 2e-30 seq257 127 2e-23 seq107 122 1e-21 seq549 91.5 2e-12 >seq138 Length=184101 Score = 150 bits (166), Expect = 2e-30 Identities = 98/108 (91%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||||||||| || |||||||||||||| ||||| | || |||||| |||| |||||| Sbjct 105059 GCCGCCAACTATCTTGACATCAAGCCTCTTCTCGACATCGGCTGCAAGACTGTCGCCAAC 105118 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293 ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 105119 ATGATCAAGGGCAAGTCTCCCGAGGAGATCCGCAAGACCTTTAACATC 105166 >seq257 Length=534895 Score = 127 bits (140), Expect = 2e-23 Identities = 111/138 (80%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| ||||| ||||| |||||| ||||| || || | |||||||||||| Sbjct 213165 GACAGCATCGGTGGCACCGTGACCTGCGTGATCCGCAATGTTCCAGTCGGCCTCGGCGAG 213224 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| |||||||| ||||||||||||||||| ||||| || ||| Sbjct 213225 CCCTGCTTCGACAAGCTCGAGGCCAAACTCGCCCACGCCATGCTCAGCATCCCCGCAACC 213284 Query 19167 AAGGGATTCGAGATTGGC 19184 ||||| || || || ||| Sbjct 213285 AAGGGTTTTGAAATCGGC 213302 >seq107 Length=114770 Score = 122 bits (134), Expect = 1e-21 Identities = 172/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| ||||||||||| || | || ||||| Sbjct 97303 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCAGCAAGGGAGATG 97244 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||| ||| ||| | | ||||| | || Sbjct 97243 GACTCCATGAAGTCGAAGGGGTTGGTGGCGTTGAAGTACTTCTTGTTGCCGAGAGCAACG 97184 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || || ||||| ||||| ||||||||||||||||||||||| || ||||||||| | | Sbjct 97183 AGAAGACGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATGCCAAGG 97124 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || | || | | ||||| ||||| || | || ||||| || ||| Sbjct 97123 AGAGCACAAGGAAGAGCATCTGTGAGGAACTCCTTCTCAATAGCAACAGCCTCAACAATG 97064 Query 868931 AT 868932 || Sbjct 97063 AT 97062 >seq549 Length=441068 Score = 91.5 bits (100), Expect = 2e-12 Identities = 200/300 (67%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||| || || |||| ||| ||||| || |||||||| | | |||||||| Sbjct 60044 CTGGTCAACGTATCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAAGAATTCCGTTGGA 60103 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||| || | ||| | ||| | || || | ||| || | || Sbjct 60104 TGATCCGTTGGTACCACTGATGTAAGAGCCAGTAGCACGGATACGGTGGACGTTGAGACC 60163 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| || || || | ||| || || | || ||| || | ||||||||||| ||||| Sbjct 60164 GATACCACCAGCAGTCTTTGAAATCATAGCACACGTCTTCAATGTGTCGTAGATACCCTC 60223 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||| ||| ||||||| || || || ||||| || | || || || | || || Sbjct 60224 GATACTGTCCTCCTTCATATCGACCAGGAAGCAGGAAGCCAGCTGAGGCTGGGGAGTACC 60283 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 || ||||| || ||||| | || ||||| |||| | | ||||| || |||||| Sbjct 60284 CGCATTGAACAGAGTGGGGGAGGCGTGTGTGAAGAACTTCTGGGACATCAGGTTGTAGGT 60343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107076010194090