Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ustus_20[genbank_20GCA_5F000812125.1_202014-12-31] 770 sequences; 38,351,268 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq107 89.7 1e-12 seq549 86.0 1e-11 >seq107 Length=114770 Score = 89.7 bits (98), Expect = 1e-12 Identities = 146/209 (70%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 131801 AAGAAAGCAGAATGGGCTATTAAATGGATTCAAGAT---GATTCCGCTAATTTTTCTACA 131857 ||||| || | |||||||| | |||||||||||| || ||| || || || Sbjct 96801 AAGAAGGCCCAGTGGGCTATCAGATGGATTCAAGACCAGGAATCCACT---TTCGCTCAG 96857 Query 131858 AGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATC 131917 | || || || || ||| || || ||||| ||||| || || | || | ||||| Sbjct 96858 CGTCTGGTTGCATTCGCTGCCGTCGAGGGTATTTTCTTCTCTGGCTCCTTTGCTTCTATC 96917 Query 131918 TTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCG 131977 || ||||| ||||||||||| |||||||||| ||| | || |||||| | ||||||| Sbjct 96918 TTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGCCTCACCTTCTCCAATGAGCTCATCTCC 96977 Query 131978 AGAGATGAAGCATTGCATACTGAATTTGC 132006 | || || | | || ||||| ||||| Sbjct 96978 CGTGACGAGGGTCTCCACACTGATTTTGC 97006 >seq549 Length=441068 Score = 86.0 bits (94), Expect = 1e-11 Identities = 152/220 (69%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 110677 CAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAG 110736 |||| ||| || |||| ||| | ||||||||||| |||| || ||| || | || | Sbjct 60101 CAAC-GGAATTCTTCCCATGCTTCGAGTCTTCAACAACACCGCTCGATACGTTGACCAGG 60043 Query 110737 GTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATAT 110793 | || ||| | || | ||||| ||||| || || || |||||| | ||| | | Sbjct 60042 GAGGAAACAAGCGTCCAGGTGCTTTTGCGATCTACCTTGAGCCCTGGCATGCTGATGTTT 59983 Query 110794 TTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTAT 110853 |||| ||||| || || ||||| || || ||| || ||| ||||| ||||| | | Sbjct 59982 TTGAGTTCTTGGATCTGCGTAAGAACCACGGAAAGGAGGAAGTCAGAGCTCGTGACCTGT 59923 Query 110854 TTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGT 110893 | ||||| |||||| | ||| | |||||||| || || Sbjct 59922 TCTATGCTCTGTGGACCCCCGATCTGTTCATGAAGCGGGT 59883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186801091349970