Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ustus_20[genbank_20GCA_5F000812125.1_202014-12-31] 770 sequences; 38,351,268 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq549 185 1e-41 seq107 89.7 7e-13 >seq549 Length=441068 Score = 185 bits (204), Expect = 1e-41 Identities = 479/723 (66%), Gaps = 8/723 (1%) Strand=Plus/Plus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 ||||| || || || | || || |||| |||||| ||||| || || | | | | Sbjct 59805 TCGAACTCGTCGCCATAGACGTCTGCCAAGCCAGGAGCCTCATTGGGGCAGAAGAGGGTC 59864 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AA 69635 || || | | | ||| || || ||||| || |||||||| |||| ||||| ||| || Sbjct 59865 CAATCACCGTTAGCCTCGACCCGCTTCATGAACAGATCGGGGGTCCACAGAGC-ATAGAA 59923 Query 69636 GAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCAT 69695 || || | | ||| ||| || ||||| || || ||||| | ||||| | Sbjct 59924 CAGGTCACGAGCTCTGACTTCCTCCTTTCCGTGGTTCTTACGCAGATCCAAGAACTCAAA 59983 Query 69696 AATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCC 69755 || ||||| |||||| || || || || ||||| | | || || || || |||||||| Sbjct 59984 AACATCAGCATGCCAGGGCTCAAGGTAGATCGCAAAAGCACCTGGACGCTTGTTTCCTCC 60043 Query 69756 CTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGA 69815 ||| || | ||||| || ||||| || |||||| ||||| |||| ||| || || || Sbjct 60044 CTGGTCAACGTATCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAAGAATTCCGTTGGA 60103 Query 69816 TTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACC 69875 | || || || ||| || ||| || | || || ||| | ||||| Sbjct 60104 TGATCCGTTGGTACCACTGATGTAAGAGCCAGTAGCACGGATACGGTGGACGTTGAGACC 60163 Query 69876 TATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGT-TTCAATGTGTCATATATACCCT 69934 || || || || | || || || | |||||| ||| ||||||||||| || ||||||| Sbjct 60164 GATACCACCAGCAGTCTTTGAAATCATAGCACA-CGTCTTCAATGTGTCGTAGATACCCT 60222 Query 69935 CTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTC 69994 | || || || || |||| | | || || ||| || || ||| | || ||| | Sbjct 60223 CGATACTGTCCTCCTTCATATCGACCAGGAAGCAGGAAGCCAGCTGAGGCTGGGGAGTAC 60282 Query 69995 CCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATG 70054 ||||||| || | || || || ||||| ||||| | || | || | ||| ||||| | Sbjct 60283 CCGCATTGAACAGAGTGGGGGAGGCGTGTGTGAAGAACTTCTGGGACATCAGGTTGTAGG 60342 Query 70055 TTTCAATAGCTGATTCTATATCCCACTG--ATGAATTCCTATCGCGACACGCATCAACAT 70112 | ||||| ||| ||| || || || ||||| || | || |||||||||| || Sbjct 60343 TCTCAATCGCT--CTCTCGATGTCATTGCCGTGAATACCGACGGCAACACGCATCAGCAG 60400 Query 70113 ATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGT 70172 ||||| || || || | || ||| | || ||||| || || ||||| Sbjct 60401 TTGCTGGGGACGCTCGGCAACCTTGCCATTGAGACGCAGAAGGTACGAGCGCTCAAGAGT 60460 Query 70173 TTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTT 70232 ||| || ||||| ||||||| ||| |||| ||||||| || | ||||| |||| Sbjct 60461 TTTGAAACCAAAGAAGTTGTAGTTAAAATCTCGATCGTAAACGATGGCGGAATTAAGTTC 60520 Query 70233 ATC 70235 ||| Sbjct 60521 ATC 60523 >seq107 Length=114770 Score = 89.7 bits (98), Expect = 7e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718 || || || || ||||| |||||||| ||||||||||| || ||||| || || | |||| Sbjct 96967 TCATTGGAGAAGGTGAGGCCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATAGAAGCA 96908 Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765 || || ||||| ||||| || || || || || || |||||||| || Sbjct 96907 AAGGAGCCAGAGAAGAAAATACCCTCGACGGCAGCGAATGCAACCAG 96861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686902188502800