Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ustus_20[genbank_20GCA_5F000812125.1_202014-12-31] 770 sequences; 38,351,268 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq549 194 2e-44 >seq549 Length=441068 Score = 194 bits (214), Expect = 2e-44 Identities = 381/557 (68%), Gaps = 10/557 (2%) Strand=Plus/Minus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254 ||||| || ||| | ||||| ||||| | ||| | | | | |||||| ||| || Sbjct 60394 ATGCGTGTTGCCGTCGGTATTCACGGCAATGACATCGAGAGAGCGATTGAGACCTACAAC 60335 Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314 | ||| ||| |||| ||| || |||||| | || || |||||||| || ||||| Sbjct 60334 CTGATGTCCCAGAAGTTCTTCACACACGCCTCCCCCACTCTGTTCAATGCGGGTACTCCC 60275 Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374 || |||||| || | |||||||||||| | |||||||| ||| ||||| || ||| Sbjct 60274 CAGCCTCAGCTGGCTTCCTGCTTCCTGGTCGATATGAAGGAGGACAGTATCGAGGGTATC 60215 Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434 ||||| || | ||| |||||| || || ||| | |||||||||||| || || Sbjct 60214 TACGACACATTGAAGACGTGTGCTATGATTTCAAAGACTGCTGGTGGTATCGGTCTCAAC 60155 Query 53435 TGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492 || | || ||||||| | ||| | |||| || || ||||| || | | Sbjct 60154 --GTCCACCGTATCCGTGCTACTGGCTCTTACATCAGTGGTACCAACGGATCATCCAACG 60097 Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552 |||| | || ||||| || |||||||||||||| || || ||||| ||||||| || Sbjct 60096 GAATTCTTCCCATGCTTCGAGTCTTCAACAACACCGCTCGATACGTTGACCAGGGAGGAA 60037 Query 53553 GGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611 ||||| | ||| | | || || |||||||| ||||| ||||| || || || | ||| Sbjct 60036 ACAAGCGTCCAGGTG-CTTTTGCGATCTACCTTGAGCCCTGGCATGCTGATGTTTTTGAG 59978 Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGAT--GCGCTGCCGTGACCTGTTTA 53669 || | || |||||| ||| || || | || || | | ||| ||||||||||| Sbjct 59977 TTCTTGGATCTGCGTAAGAACCACGGAAAGGAGGAAGTCAGAGCT--CGTGACCTGTTCT 59920 Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACC 53729 |||||||||| || || || |||||| | ||| ||| ||| || ||| || Sbjct 59919 ATGCTCTGTGGACCCCCGATCTGTTCATGAAGCGGGTCGAGGCTAACGGTGATTGGACCC 59860 Query 53730 TGATGTGCCCGAACGAG 53746 | | ||||| || ||| Sbjct 59859 TCTTCTGCCCCAATGAG 59843 Score = 98.7 bits (108), Expect = 1e-15 Identities = 114/150 (76%), Gaps = 8/150 (5%) Strand=Plus/Minus Query 55778 GACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATC---TTC 55834 || ||| ||| ||||||||||| ||||| |||||||| |||||||| |||||| || Sbjct 58776 GAGATGGCTGCCGATCGTGGTGCCTACATTGACCAGTCTCAGTCTCTCAACATCCATCTC 58717 Query 55835 ATGGAGAATCCTTCACTGGCCAAGTTGAGCTCG-ATGCACTTTTACGGGTGGAAGAAGGG 55893 | |||| || | ||| |||| | | || | ||||||||| |||||||||| ||| Sbjct 58716 AAGGAG---CCGACGATGGGCAAGATCA-CTAGCATGCACTTTGCTGGGTGGAAGATGGG 58661 Query 55894 ACTCAAGACGGGTATGTACTATCTGCGGAC 55923 |||||||| || |||||||| || || || Sbjct 58660 TCTCAAGACTGGCATGTACTACCTTCGTAC 58631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547210733046000