Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ustus_20[genbank_20GCA_5F000812125.1_202014-12-31] 770 sequences; 38,351,268 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq46 91.5 1e-13 >seq46 Length=358866 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || ||||| || || |||||||| | || ||||| | | Sbjct 220649 ATGCAGATTTTCGTCAAGACACTCACTGGGAAGACGATCACGTTGGAGGTTGAGAGCTCC 220590 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || ||| | || || || ||| ||||| ||||| | || ||||| || Sbjct 220589 GACACTATCGATAATGTCAAGAC-TAAGATTCAAGACAAGGAAGGAATCCCCCCAGACCA 220531 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || || ||||| || | ||||||| ||| || | || ||||| Sbjct 220530 GCAGCGCCTTATCTTCGCTGGCAAGCAGTTAGAAGACGGACGTACCCTCTCTGACTACAA 220471 Query 23790 CATACAAAAAGAGTCCACA 23808 ||| || || ||| |||| Sbjct 220470 CATCCAGAAGGAGAGCACA 220452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338006427991160