Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ustus_20[genbank_20GCA_5F000812125.1_202014-12-31] 770 sequences; 38,351,268 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq549 228 1e-54 >seq549 Length=441068 Score = 228 bits (252), Expect = 1e-54 Identities = 578/872 (66%), Gaps = 8/872 (1%) Strand=Plus/Plus Query 76545 CCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTT 76604 |||| |||||| ||||| || || | | | ||| ||||| | ||| ||||| | Sbjct 59830 CCAAGCCAGGAGCCTCATTGGGGCAGAAGAGGGTCCAATCACCGTTAGCCTCGACCCGCT 59889 Query 76605 TCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCAT 76664 |||| || ||||| || |||| |||||| || || || || | ||| ||| || | Sbjct 59890 TCATGAACAGATCGGGGGTCCACAGAGCATAGAACAGGTCACGAGCTCTGACTTCCTCCT 59949 Query 76665 TTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGAT 76724 |||| ||||| ||||| | |||||| | || ||||| |||||| || || || | Sbjct 59950 TTCCGTGGTTCTTACGCAGATCCAAGAACTCAAAAACATCAGCATGCCAGGGCTCAAGGT 60009 Query 76725 ATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTAT 76784 | ||||| | | |||| || || || || |||||||| || | |||| || ||||| | Sbjct 60010 AGATCGCAAAAGCACCTGGACGCTTGTTTCCTCCCTGGTCAACGTATCGAGCGGTGTTGT 60069 Query 76785 TATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAAC 76844 | | |||| | ||| |||| ||| ||||| |||| || || || ||| || ||| Sbjct 60070 TGAAGACTCGAAGCATGGGAAGAATTCCGTTGGATGATCCGTTGGTACCACTGATGTAAG 60129 Query 76845 TTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTA 76904 ||| ||||| ||| | || || || || || || | || || || | Sbjct 60130 AGCCAGTAGCACGGATACGGTGGACGTTGAGACCGATACCACCAGCAGTCTTTGAAATCA 60189 Query 76905 GAGCACAGCGT-TTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGA 76963 |||||| ||| ||||||||||| ||||| ||||| ||||| || ||| |||| | | Sbjct 60190 TAGCACA-CGTCTTCAATGTGTCGTAGATACCCTCGATACTGTCCTCCTTCATATCGACC 60248 Query 76964 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCA 77023 || || ||| || || ||| | || ||| || ||||| |||| || || || || Sbjct 60249 AGGAAGCAGGAAGCCAGCTGAGGCTGGGGAGTACCCGCATTGAACAGAGTGGGGGAGGCG 60308 Query 77024 TGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCAT 77083 || ||||| | || | || | || ||||| || ||||| || ||| || ||| Sbjct 60309 TGTGTGAAGAACTTCTGGGACATCAGGTTGTAGGTCTCAATCGCT--CTCTCGATGTCAT 60366 Query 77084 TG--ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTAT 77141 || ||||| || || || |||||||||| || ||||| || || || || ||| Sbjct 60367 TGCCGTGAATACCGACGGCAACACGCATCAGCAGTTGCTGGGGACGCTCGGCAACCTTGC 60426 Query 77142 TATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 77201 ||| | || | ||| || || | |||||| |||||||| ||||||| || Sbjct 60427 CATTGAGACGCAGAAGGTACGAGCGCTCAAGAGTTTTGAAACCAAAGAAGTTGTAGTTAA 60486 Query 77202 AGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATC-C 77260 | |||| ||||||| || | ||||| |||| || || ||| | || || || Sbjct 60487 AATCTCGATCGTAAACGATGGCGGAATTAAGTTCATCGGCATGTTTCATCACGATCTCGT 60546 Query 77261 ATGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAAT 77320 | | | | || || || || || | | | || || || || ||||||| | Sbjct 60547 ACGTCTCTTGT-GATATCATAGGCGCAGGCTTCTTGTTCTTGGGGTTGACATAGTGGTAG 60605 Query 77321 AAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCT 77380 | |||| || ||| | ||| | || ||||||| |||||| || ||||| ||||| Sbjct 60606 AGGTCTGAGATAACGAGGGAGAATTGCTTCTTTGTTTGCTTGTGGAGGTTCGACACGGCA 60665 Query 77381 ATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412 || | ||| || || || ||||||||||| || Sbjct 60666 ATACGAGCGGCAAGGATGGCATAGTCAGGGTG 60697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712927538006400