Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ustus_20[genbank_20GCA_5F000812125.1_202014-12-31] 770 sequences; 38,351,268 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq46 147 5e-30 seq131 116 9e-21 >seq46 Length=358866 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || |||||||| | ||||| || ||||| ||| Sbjct 220646 CAGATTTTCGTCAAGACACTCACTGGGAAGACGATCACGTTGGAGGTTGAGAGCTCCGAC 220587 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct 220586 ACTATCGATAATGTCAAGACTAAGATTCAAGACAAGGAAGGAATCCCCCCAGACCAGCAG 220527 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||| | ||||| ||| | || || | || || ||| || Sbjct 220526 CGCCTTATCTTCGCTGGCAAGCAGTTAGAAGACGGACGTACCCTCTCTGACTACAACATC 220467 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || ||||| || || || Sbjct 220466 CAGAAGGAGAGCACACTCCACCTGGT 220441 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || || || || || || || || ||| | ||||| || ||| ||| Sbjct 220874 CAAATTTTTGTCAAGACCCTTACTGGCAAGACTATTACCTTGGAGGTCGAGTCCTCCGAC 220815 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||||||| ||||| || ||||| |||||||| ||||| Sbjct 220814 ACGATCGATAATGTGAAGACAAAGATTCAAGACAAGGAGGGAATTCCTCCGGATCAGCAG 220755 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||||||||| ||||| || ||||| | || || | || || ||| | Sbjct 220754 CGTCTTATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACACTCTCGGACTACAACATT 220695 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| ||||| || || || Sbjct 220694 CAGAAGGAATCGACACTCCACCTCGT 220669 >seq131 Length=307418 Score = 116 bits (128), Expect = 9e-21 Identities = 143/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 237859 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC---GACAC 237915 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || || || ||||||||||| || Sbjct 237916 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCG 237975 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || ||||||||||| || ||||| || ||||| | || || ||| || ||| |||| Sbjct 237976 CCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGTACCCTGAGCGACTACAACATCCA 238035 Query 178106 AAAAGAATCAACAC 178119 || | || || || Sbjct 238036 GAAGGTATGAAGAC 238049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203719324439380