Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq221 163 3e-35 seq176 107 2e-18 >seq221 Length=929178 Score = 163 bits (180), Expect = 3e-35 Identities = 472/722 (65%), Gaps = 6/722 (1%) Strand=Plus/Minus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 || ||||||||||| |||||| | | | |||||| || | || || | || | | Sbjct 705525 TCGAACTCGTCTCCGTAAACATCGGCAAGGCCAGGAGCCTCGTTGGGGCAGAACAGAGTC 705466 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 54069 || || |||| ||| || || ||||| || || || ||| |||| ||||| ||| || Sbjct 705465 CAGTCACCGTTGGCCTCGACCCGCTTCATGAACAGGTCGGGAGTCCAGAGAGC-ATAGAA 705407 Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 54129 || || | || ||| |||||| || || ||||| |||||| | ||| | | Sbjct 705406 CAGGTCACGGGCTCTCACTTCCTCCTTACCGTGGTTCTTACGAAGATCCAAGAATTCGAA 705347 Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189 | ||| || ||||| || |||| ||| |||| | | | || || || ||||| || || Sbjct 705346 GACATCCGAGTGCCAGGGCTCCAGGTAGATGGCGAAAGCGCCGGGACGCTTGTTGCCACC 705287 Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249 ||| || | || | || |||||||| | || | | ||| |||| ||||| ||||| Sbjct 705286 CTGGTCAACATACCGGGCAGTGTTATTGAACACACGAAGCATAGGAACGATACCGTTGGA 705227 Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 54309 | ||| ||||| || || ||| ||| ||||||| || || ||||| Sbjct 705226 AGAACCGTTGGTTCCACCAATGTAGGATCCGGTGGCACGGATCCGGTGAACGTTCAGACC 705167 Query 54310 TATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 54369 || || || || | || || || | || || || | |||||||| || || || Sbjct 705166 GATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGGGTATCATAAATACCATC 705107 Query 54370 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 54429 || || || ||| |||| | | || || || || | ||| | || || || Sbjct 705106 AATGCTGTCTTCCTTCATATCGACCAGGAAGCACGAAGCAAGCTGGGGCTGAGGGGTACC 705047 Query 54430 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 54489 ||||| || | |||||| ||||| ||||| || | || | || | | | ||| || Sbjct 705046 GGCATTGAACAGGGTAGGGGAAGCATGCGTGAAGTACTTCTGGGACATCAAGTGGTAGGT 704987 Query 54490 CTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 54549 ||||||||| || |||||| | ||||| || || || |||||||| | || ||| Sbjct 704986 CTCGATAGCCCGCTCAATATCCTCTCCGTGAATACCGACAGCCACACGCATCAGCAGGTG 704927 Query 54550 CTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTT 54609 |||||| | || | | ||| | | ||||||||| || || | || || Sbjct 704926 CTGAGGACGCTCGGCAACCTTTCCATCCACCCGCAGCAAGTACGACCGCTCAAGGGTCTT 704867 Query 54610 AAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTA 54667 || || ||| ||||||| ||||| || || ||||| | |||| | |||||||| | | Sbjct 704866 GAAGCCGAAAAAGTTGTAGTTGAAA--TCCCGGTCGTACACAATAGCCGAGTTGAGCTCA 704809 Query 54668 TC 54669 || Sbjct 704808 TC 704807 >seq176 Length=1444596 Score = 107 bits (118), Expect = 2e-18 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 24131 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 24190 ||| || ||||| || ||| ||||||||||| | | ||| | |||||||| || || Sbjct 728054 CAAGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAAATCAGCTCGTTGGAGAAAGT 728113 Query 24191 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 24250 ||| || ||||| ||||||||||| || ||||| || ||||| || || ||||| || || Sbjct 728114 GAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAAATGGAGGCGAAAGATCCGGAGAA 728173 Query 24251 GAAAATTCCTTCTACTGCCGCAAAGGC 24277 ||| || || || || || || ||||| Sbjct 728174 GAAGATACCCTCAACGGCGGCGAAGGC 728200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593719826256720