Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015-
10-06] 239 sequences; 36,072,589 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq183 120 3e-22
>seq183
Length=3359036
Score = 120 bits (132), Expect = 3e-22
Identities = 144/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||| || || || |||||||| | ||| || || |||| || |||||||| || |||||
Sbjct 618906 CTCTTTCTGGATGTTGTAATCGGACAGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAA 618847
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||| ||||||||||||| || | | |||||| | | ||| | || | | |||
Sbjct 618846 AATGAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTAT-CTTGAATCTTGCTCTTCACGT 618788
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | |||||||| ||||| || || | ||||||||| ||||| || || ||||| |
Sbjct 618787 TGTCGATGGTGTCGCTAGATTCAACTTCCAACGTGATGGTCTTGCCGGTGAGGGTCTTGA 618728
Query 43171 CAAAGATTTGCAT 43183
| |||||||||||
Sbjct 618727 CGAAGATTTGCAT 618715
Score = 116 bits (128), Expect = 4e-21
Identities = 158/214 (74%), Gaps = 10/214 (5%)
Strand=Plus/Minus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
|||| |||| ||||||||||| ||||| ||||| |||| || || ||| |||| ||
Sbjct 619151 ACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGCCCGTCCTCA 619092
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
|||||||| || || || || || ||||||||||| | || | | |||||||| | ||
Sbjct 619091 AGCTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGT-CTTG 619033
Query 43095 ATTTTTTGT-TTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGG 43149
| | || | |||| ||| | | | |||||| |||| || || || | ||||| |
Sbjct 619032 AATCTTGCTCTTGA-CGTTGTCGATCGTGTCCGAGCTC---TCGACCTCCAATGTGATTG 618977
Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
| ||||| || |||||||| |||||||| |||||
Sbjct 618976 TCTTGCCAGTGAGCGTCTTGACAAAGATCTGCAT 618943
Score = 109 bits (120), Expect = 6e-19
Identities = 135/182 (74%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| || || ||||| || ||| || || | || || ||||||||||||||||| |
Sbjct 1361910 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 1361969
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| || ||||||||||||| || | || |||||||||| ||| || |||| ||| |
Sbjct 1361970 TAAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTG 1362028
Query 43114 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | ||||||||||| || || |||| || ||||| || ||||| || ||||| ||
Sbjct 1362029 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 1362088
Query 43173 AA 43174
||
Sbjct 1362089 AA 1362090
Score = 102 bits (112), Expect = 9e-17
Identities = 125/168 (74%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
|||||||| || ||||| || | |||||| || | || || | |||||| ||||||||
Sbjct 618376 TCCTTTTGGATGTTGTAGTCGGACAGAGTGCGACCATCTTCCAACTGCTTGCCAGCGAAA 618317
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| || ||||||||||| | || | || |||||||||| ||| || |||| |||
Sbjct 618316 ATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTT 618258
Query 43113 GCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159
| | | ||||||||||| || || || | |||||||| ||||| ||
Sbjct 618257 GTCGATGGTGTCGCTCGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 618210
Score = 93.3 bits (102), Expect = 5e-14
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| || || |||||||| | || || || | || || | |||||||||||||||
Sbjct 618677 TCCTTCTGGATGTTGTAATCGGACAAGGTGCGGCCATCTTCCAACTGCTTACCAGCGAAG 618618
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| | ||||||||||||| || | | |||||||||| ||| || |||| |
Sbjct 618617 ATCAAACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTA 618558
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | |||||||| ||||| || |||| || ||||| || || || || ||||| ||
Sbjct 618557 TCGATGGTGTCGCTGGATTCAACCTCGAGGGTAATGGTCTTTCCAGTAAGGGTCTTGAC 618499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571815891694920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |