Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq183 120 3e-22 >seq183 Length=3359036 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || || || |||||||| | ||| || || |||| || |||||||| || ||||| Sbjct 618906 CTCTTTCTGGATGTTGTAATCGGACAGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAA 618847 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||| | | ||| | || | | ||| Sbjct 618846 AATGAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTAT-CTTGAATCTTGCTCTTCACGT 618788 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||||| ||||| || || | ||||||||| ||||| || || ||||| | Sbjct 618787 TGTCGATGGTGTCGCTAGATTCAACTTCCAACGTGATGGTCTTGCCGGTGAGGGTCTTGA 618728 Query 43171 CAAAGATTTGCAT 43183 | ||||||||||| Sbjct 618727 CGAAGATTTGCAT 618715 Score = 116 bits (128), Expect = 4e-21 Identities = 158/214 (74%), Gaps = 10/214 (5%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||| |||| ||||||||||| ||||| ||||| |||| || || ||| |||| || Sbjct 619151 ACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGCCCGTCCTCA 619092 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || || || || || ||||||||||| | || | | |||||||| | || Sbjct 619091 AGCTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGT-CTTG 619033 Query 43095 ATTTTTTGT-TTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGG 43149 | | || | |||| ||| | | | |||||| |||| || || || | ||||| | Sbjct 619032 AATCTTGCTCTTGA-CGTTGTCGATCGTGTCCGAGCTC---TCGACCTCCAATGTGATTG 618977 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | ||||| || |||||||| |||||||| ||||| Sbjct 618976 TCTTGCCAGTGAGCGTCTTGACAAAGATCTGCAT 618943 Score = 109 bits (120), Expect = 6e-19 Identities = 135/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || ||| || || | || || ||||||||||||||||| | Sbjct 1361910 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 1361969 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||||| || | || |||||||||| ||| || |||| ||| | Sbjct 1361970 TAAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTG 1362028 Query 43114 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 1362029 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 1362088 Query 43173 AA 43174 || Sbjct 1362089 AA 1362090 Score = 102 bits (112), Expect = 9e-17 Identities = 125/168 (74%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 |||||||| || ||||| || | |||||| || | || || | |||||| |||||||| Sbjct 618376 TCCTTTTGGATGTTGTAGTCGGACAGAGTGCGACCATCTTCCAACTGCTTGCCAGCGAAA 618317 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 618316 ATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTT 618258 Query 43113 GCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | | | ||||||||||| || || || | |||||||| ||||| || Sbjct 618257 GTCGATGGTGTCGCTCGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 618210 Score = 93.3 bits (102), Expect = 5e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || |||||||| | || || || | || || | ||||||||||||||| Sbjct 618677 TCCTTCTGGATGTTGTAATCGGACAAGGTGCGGCCATCTTCCAACTGCTTACCAGCGAAG 618618 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | ||||||||||||| || | | |||||||||| ||| || |||| | Sbjct 618617 ATCAAACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTA 618558 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||||| ||||| || |||| || ||||| || || || || ||||| || Sbjct 618557 TCGATGGTGTCGCTGGATTCAACCTCGAGGGTAATGGTCTTTCCAGTAAGGGTCTTGAC 618499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571815891694920