Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq183 129 5e-25 >seq183 Length=3359036 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||||||||||||||||||||||||||||||||| || ||| |||| || Sbjct 619151 ACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGCCCGTCCTCA 619092 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || |||| ||||| ||||| ||||| | |||||||||||| | Sbjct 619091 AGCTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGA 619032 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | ||||| | ||| ||||||| || || |||||| Sbjct 619031 ATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCGACCTCCAATGTGATTGTCTTG 618972 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| |||||||| ||||| Sbjct 618971 CCAGTGAGCGTCTTGACAAAGATCTGCAT 618943 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||| ||||| |||||||| ||| ||| ||| |||| || || || Sbjct 618918 GTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGACAGGGTGCGGCCGTCTTCGAGCTG 618859 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 ||||||||||| || | ||||| |||||||| || | |||||||| || ||| || Sbjct 618858 CTTTCCGGCGAAAATGAGACGCTGCTGGTCGGGGGGAATTCCCTCCTTATCTTGAATCTT 618799 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | | || || |||| || || |||||||| || Sbjct 618798 GCTCTTCACGTTGTCGATGGTGTCGCTAGATTCAACTTCCAACGTGATGGTCTTGCCGGT 618739 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || ||||||||||| Sbjct 618738 GAGGGTCTTGACGAAGATTTGCAT 618715 Score = 87.8 bits (96), Expect = 1e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206 ||||||| |||||||||||| |||| ||| | || || || || || || ||||| | Sbjct 1361910 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 1361969 Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266 | | ||||| |||||||| || | |||||||||||| || || ||| || Sbjct 1361970 TAAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 1362029 Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326 | | | |||| | ||| || || | |||||| ||||| |||||||| ||||| || | Sbjct 1362030 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 1362089 Query 45327 A 45327 | Sbjct 1362090 A 1362090 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || || |||||||| |||||||| ||| || ||| | || ||| Sbjct 618695 ACCAGGTGGAGGGTAGATTCCTTCTGGATGTTGTAATCGGACAAGGTGCGGCCATCTTCC 618636 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || || || ||||| ||||| ||||| ||||||||||| | ||||||||||||| Sbjct 618635 AACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGG 618576 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | || ||||| | |||||| ||||| Sbjct 618575 ATCTTCGACTTGACATTATCGATGGTGTCGCTGGATTCAACCTCGAGGGTAATGGTCTTT 618516 Query 45308 CCCGTCAGAGTCTTCAC 45324 || || || ||||| || Sbjct 618515 CCAGTAAGGGTCTTGAC 618499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074049220019