Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq221 154 2e-32 seq176 116 5e-21 >seq221 Length=929178 Score = 154 bits (170), Expect = 2e-32 Identities = 470/722 (65%), Gaps = 6/722 (1%) Strand=Plus/Minus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 |||||||||||||| |||||| | | | | |||| || | || || | || | | Sbjct 705525 TCGAACTCGTCTCCGTAAACATCGGCAAGGCCAGGAGCCTCGTTGGGGCAGAACAGAGTC 705466 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63307 || || |||| ||| || || ||||| || || || ||| |||| ||||| ||| || Sbjct 705465 CAGTCACCGTTGGCCTCGACCCGCTTCATGAACAGGTCGGGAGTCCAGAGAGC-ATAGAA 705407 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 || || | | ||| |||||| || || ||||| |||||| | ||| | | Sbjct 705406 CAGGTCACGGGCTCTCACTTCCTCCTTACCGTGGTTCTTACGAAGATCCAAGAATTCGAA 705347 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 | ||| || ||||| || |||| ||| ||||| | | | || || || ||||| || || Sbjct 705346 GACATCCGAGTGCCAGGGCTCCAGGTAGATGGCGAAAGCGCCGGGACGCTTGTTGCCACC 705287 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 ||| || | || | || |||||||| | || | | ||| |||| |||||||| || Sbjct 705286 CTGGTCAACATACCGGGCAGTGTTATTGAACACACGAAGCATAGGAACGATACCGTTGGA 705227 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACC 63547 ||| ||||| || || ||| ||| ||||||| || || ||||| Sbjct 705226 AGAACCGTTGGTTCCACCAATGTAGGATCCGGTGGCACGGATCCGGTGAACGTTCAGACC 705167 Query 63548 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTC 63607 || || || || | || || || | || || || | || ||||| || || || Sbjct 705166 GATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGGGTATCATAAATACCATC 705107 Query 63608 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCC 63667 ||||| || || |||| | | || || || || | ||| | ||| || || Sbjct 705106 AATGCTGTCTTCCTTCATATCGACCAGGAAGCACGAAGCAAGCTGGGGCTGAGGGGTACC 705047 Query 63668 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63727 ||||| || | |||||| ||||| ||||| || | || | || | | | ||| || Sbjct 705046 GGCATTGAACAGGGTAGGGGAAGCATGCGTGAAGTACTTCTGGGACATCAAGTGGTAGGT 704987 Query 63728 CTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 63787 ||| ||||| || |||||| | ||||| || || || |||||||| | || ||| Sbjct 704986 CTCGATAGCCCGCTCAATATCCTCTCCGTGAATACCGACAGCCACACGCATCAGCAGGTG 704927 Query 63788 CTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 63847 |||||| | || ||| || | | || |||||| || || | || || Sbjct 704926 CTGAGGACGCTCGGCAACCTTTCCATCCACCCGCAGCAAGTACGACCGCTCAAGGGTCTT 704867 Query 63848 AAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTA 63905 || || ||| ||||||| ||||| || || ||||| | |||| |||| ||||||| | Sbjct 704866 GAAGCCGAAAAAGTTGTAGTTGAAA--TCCCGGTCGTACACAATAGCCGAGTTGAGCTCA 704809 Query 63906 TC 63907 || Sbjct 704808 TC 704807 >seq176 Length=1444596 Score = 116 bits (128), Expect = 5e-21 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637 ||| || ||||| || ||| ||||||||||| | | ||| | ||||| || || || Sbjct 728054 CAAGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAAATCAGCTCGTTGGAGAAAGT 728113 Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697 ||| || ||||| ||||||||||| || ||||| || ||||| ||||| |||||||| || Sbjct 728114 GAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAAATGGAGGCGAAAGATCCGGAGAA 728173 Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGC 33724 |||||| || || || || || ||||| Sbjct 728174 GAAGATACCCTCAACGGCGGCGAAGGC 728200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629815718419920