Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq176 91.5 1e-13 seq183 86.0 6e-12 >seq176 Length=1444596 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 ||||| |||| ||||| || ||||| || || ||||| | ||| | | |||| Sbjct 727996 GAGGCTGTCGCTATTGAGAAGGAGTTCTTGACCGACGCCCTTCCCTGCGCCCTTCTGGGT 727937 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 |||||||| | | |||||||| ||||||||||||| || || ||| | || ||| || Sbjct 727936 ATGAACGCCAACCTGATGTGCCAGTACATCGAGTTCGTGGCTGACCGTCTCTTGGTGGCC 727877 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 ||||| | |||| |||| || || |||||||| || ||| | || || Sbjct 727876 CTCGGCAACTCGAAGTACTTCAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCC 727817 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 || | || || || ||||| ||||||| ||||| || || ||| Sbjct 727816 CTGGCTGGAAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTAC 727772 >seq183 Length=3359036 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || | ||||| || |||||||| || ||||| |||||| | Sbjct 618941 CCACCACGGAGACGGAGCACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGAC 618882 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| |||||||||||| || || || | || ||||| ||||| ||||| || Sbjct 618881 AGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGGTCGGGGGGA 618822 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || || || ||| | || | || | | || | |||||| | | || || Sbjct 618821 ATTCCCTCCTTATC-TTGAATCTTGCTCTTCACGTTGTCGATGGTGTCGCTAGATTCAAC 618763 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||||||||| | || || ||||| ||||||||| Sbjct 618762 TTCCAACGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCATA 618714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496062518008800