Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq221 176 6e-39 seq176 118 2e-21 >seq221 Length=929178 Score = 176 bits (194), Expect = 6e-39 Identities = 475/722 (66%), Gaps = 6/722 (1%) Strand=Plus/Minus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 |||||||||||||| |||||||| | | |||||| |||| || || | || | | Sbjct 705525 TCGAACTCGTCTCCGTAAACATCGGCAAGGCCAGGAGCCTCGTTGGGGCAGAACAGAGTC 705466 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 79979 || || || | ||| || || ||||| || || || ||| |||| ||||| ||| || Sbjct 705465 CAGTCACCGTTGGCCTCGACCCGCTTCATGAACAGGTCGGGAGTCCAGAGAGC-ATAGAA 705407 Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039 || || | || ||| ||||| || || ||||| |||||| | ||| | | Sbjct 705406 CAGGTCACGGGCTCTCACTTCCTCCTTACCGTGGTTCTTACGAAGATCCAAGAATTCGAA 705347 Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099 | ||| || ||||| || |||| ||| ||||| | | | || || || ||||| || || Sbjct 705346 GACATCCGAGTGCCAGGGCTCCAGGTAGATGGCGAAAGCGCCGGGACGCTTGTTGCCACC 705287 Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159 ||| || | || | || |||||||| | || | | ||| |||| ||||| ||||| Sbjct 705286 CTGGTCAACATACCGGGCAGTGTTATTGAACACACGAAGCATAGGAACGATACCGTTGGA 705227 Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 80219 | ||| ||||| || || ||| ||| ||||||| || || ||||| Sbjct 705226 AGAACCGTTGGTTCCACCAATGTAGGATCCGGTGGCACGGATCCGGTGAACGTTCAGACC 705167 Query 80220 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 80279 || || || || | || || || | || || || | |||||||| || || || Sbjct 705166 GATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGGGTATCATAAATACCATC 705107 Query 80280 TATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 80339 ||||| || || |||| | | || || || || | ||| | || || || Sbjct 705106 AATGCTGTCTTCCTTCATATCGACCAGGAAGCACGAAGCAAGCTGGGGCTGAGGGGTACC 705047 Query 80340 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGT 80399 ||||| || | |||||| ||||| ||||| || | || | |||| | | ||| || Sbjct 705046 GGCATTGAACAGGGTAGGGGAAGCATGCGTGAAGTACTTCTGGGACATCAAGTGGTAGGT 704987 Query 80400 CTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTG 80459 ||| ||||| || |||||| | ||||| || || || |||||||| | || ||| Sbjct 704986 CTCGATAGCCCGCTCAATATCCTCTCCGTGAATACCGACAGCCACACGCATCAGCAGGTG 704927 Query 80460 CTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTT 80519 |||||| | || | | ||| || | || |||||| || || | || || Sbjct 704926 CTGAGGACGCTCGGCAACCTTTCCATCCACCCGCAGCAAGTACGACCGCTCAAGGGTCTT 704867 Query 80520 AAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 80577 || || ||| ||||||| ||||| || || ||||| | |||| |||||||||| | | Sbjct 704866 GAAGCCGAAAAAGTTGTAGTTGAAA--TCCCGGTCGTACACAATAGCCGAGTTGAGCTCA 704809 Query 80578 TC 80579 || Sbjct 704808 TC 704807 >seq176 Length=1444596 Score = 118 bits (130), Expect = 2e-21 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 ||| || ||||| || ||| ||||||||||| | | ||| || |||||||| || || Sbjct 728054 CAAGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAAATCAGCTCGTTGGAGAAAGT 728113 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 ||| || ||||| ||||||||||| || ||||| || ||||| || || || || || || Sbjct 728114 GAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAAATGGAGGCGAAAGATCCGGAGAA 728173 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAG 50108 |||||| || || || ||||| ||||| || || Sbjct 728174 GAAGATACCCTCAACGGCGGCGAAGGCGACGAG 728206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266654171960