Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015-
10-06] 239 sequences; 36,072,589 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq176 147 3e-30
seq221 87.8 3e-12
>seq176
Length=1444596
Score = 147 bits (162), Expect = 3e-30
Identities = 207/288 (72%), Gaps = 2/288 (1%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| |||| || || ||||| | |||||| | ||||||
Sbjct 728670 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAAGAAATTGATCTG 728611
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| ||||| ||| | || ||| | | ||| ||| || |||||| | || || ||
Sbjct 728610 TCGAAGGATCTGCATGACTGGAACAACCGTCTGAACGAGGATGAGCGTTACTTCATCTCT 728551
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| || | || ||||| |||| ||| || || || ||||| || || || || ||
Sbjct 728550 CACGTTCTTGCTTTCTTCGCCGCCTCGGACGGCATTGTCAATGAGAACTTGCTGGAGCGC 728491
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTT-TACGGATTCCAAATCATGAT 125257
||| |||| || |||| |||| |||| ||| || |||||||| ||||||||
Sbjct 728490 TTCAGCGGAGAGGTGCAGGTTCCTGAGGC-TCGTTGTTTCTATGGATTCCAGATCATGAT 728432
Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305
||||||| | |||||||||| |||||| ||||| |||| |||||
Sbjct 728431 TGAGAACATCCACTCGGAAACCTACTCTCTTCTGATCGACACCTACAT 728384
Score = 114 bits (126), Expect = 2e-20
Identities = 326/494 (66%), Gaps = 19/494 (4%)
Strand=Plus/Minus
Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426
|| ||||| |||||| || || ||||| | ||| | |||| | | || | |
Sbjct 728266 AAGAAGGCCGAATGGGCCATCCGATGGATTCAGGACCAGCAGTCGACCTTCGGCTCTCGT 728207
Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486
|| || || ||||||||||| ||||| |||||||| || || ||| || |||| ||
Sbjct 728206 CTCGTCGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGATCTTTCGCCTCCATTTTC 728147
Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546
||||| |||||||| || || ||||| || || || | |||||| | || |||||
Sbjct 728146 TGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATTTCTCGT 728087
Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCG 125604
|||||||| || ||| |||||| ||| | || || || || || | | | |||
Sbjct 728086 GACGAGGGTCTCCACACTGACTTCGCCTGCTTGCTCTTCTCTCACCTCAACAACCGCCCC 728027
Query 125605 AGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAAC 125664
|| | ||| | || ||| ||| |||||| ||| || || || ||
Sbjct 728026 AG----CAAGCAG-GTTGTGGAGGACAT---CATTGT---CGAGGCTGTCGCTATTGAGA 727978
Query 125665 AAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGT 125724
| ||||| | ||||| |||| || | | | | || |||||| ||| || ||||
Sbjct 727977 AGGAGTTCTTGACCGACGCCCTTCCCTGCGCCCTTCTGGGTATGAACGCCAACCTGATGT 727918
Query 125725 GCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGC---AAGA 125781
|| ||||||| ||||| ||||| || ||||| || | | | ||| | |||
Sbjct 727917 GCCAGTACATCGAGTTCGTGGCTGACCGTCTCTTG---GTGGCCCTCGGCAACTCGAAGT 727861
Query 125782 TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCA 125841
| |||||||| || ||||| || |||||| || || || | || |||||||
Sbjct 727860 ACTTCAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCCCTGGCTGGAAAGACCA 727801
Query 125842 ACTTTTTCGAGAAG 125855
|||| |||||||||
Sbjct 727800 ACTTCTTCGAGAAG 727787
>seq221
Length=929178
Score = 87.8 bits (96), Expect = 3e-12
Identities = 169/248 (68%), Gaps = 6/248 (2%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| ||||| || || || |||||| | ||| ||||| |||| || |||||| ||||
Sbjct 705284 CAGGGTGGCAACAAGCGTCCCGGCGCTTTCGCCATCTACCTGGAGCCCTGGCACTCGGAT 705343
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || || || | || | || || ||| || || || | ||||| | |||
Sbjct 705344 GTCTTCGAATTCTTGGATCTTCGTAAGAACCACGGTAAGGAGGAAGTGAGAGCCCGTGAC 705403
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA---CGACGGTGGC 97052
|||| ||||| |||||| || || ||||||||||||| ||| | | ||||||
Sbjct 705404 CTGTTCTATGCTCTCTGGACTCCCGACCTGTTCATGAAGCGGGTCGAGGCCAACGGTG-- 705461
Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112
|||||| || | |||||| || | | || || || ||||| | || || |||
Sbjct 705462 -ACTGGACTCTGTTCTGCCCCAACGAGGCTCCTGGCCTTGCCGATGTTTACGGAGACGAG 705520
Query 97113 TTTGAGGC 97120
|| || ||
Sbjct 705521 TTCGATGC 705528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741056986085640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |