Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq176 147 3e-30 seq221 87.8 3e-12 >seq176 Length=1444596 Score = 147 bits (162), Expect = 3e-30 Identities = 207/288 (72%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||| || || ||||| | |||||| | |||||| Sbjct 728670 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAAGAAATTGATCTG 728611 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| ||| | || ||| | | ||| ||| || |||||| | || || || Sbjct 728610 TCGAAGGATCTGCATGACTGGAACAACCGTCTGAACGAGGATGAGCGTTACTTCATCTCT 728551 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||| || | || ||||| |||| ||| || || || ||||| || || || || || Sbjct 728550 CACGTTCTTGCTTTCTTCGCCGCCTCGGACGGCATTGTCAATGAGAACTTGCTGGAGCGC 728491 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTT-TACGGATTCCAAATCATGAT 125257 ||| |||| || |||| |||| |||| ||| || |||||||| |||||||| Sbjct 728490 TTCAGCGGAGAGGTGCAGGTTCCTGAGGC-TCGTTGTTTCTATGGATTCCAGATCATGAT 728432 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 ||||||| | |||||||||| |||||| ||||| |||| ||||| Sbjct 728431 TGAGAACATCCACTCGGAAACCTACTCTCTTCTGATCGACACCTACAT 728384 Score = 114 bits (126), Expect = 2e-20 Identities = 326/494 (66%), Gaps = 19/494 (4%) Strand=Plus/Minus Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426 || ||||| |||||| || || ||||| | ||| | |||| | | || | | Sbjct 728266 AAGAAGGCCGAATGGGCCATCCGATGGATTCAGGACCAGCAGTCGACCTTCGGCTCTCGT 728207 Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 || || || ||||||||||| ||||| |||||||| || || ||| || |||| || Sbjct 728206 CTCGTCGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGATCTTTCGCCTCCATTTTC 728147 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||| |||||||| || || ||||| || || || | |||||| | || ||||| Sbjct 728146 TGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATTTCTCGT 728087 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCG 125604 |||||||| || ||| |||||| ||| | || || || || || | | | ||| Sbjct 728086 GACGAGGGTCTCCACACTGACTTCGCCTGCTTGCTCTTCTCTCACCTCAACAACCGCCCC 728027 Query 125605 AGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAAC 125664 || | ||| | || ||| ||| |||||| ||| || || || || Sbjct 728026 AG----CAAGCAG-GTTGTGGAGGACAT---CATTGT---CGAGGCTGTCGCTATTGAGA 727978 Query 125665 AAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGT 125724 | ||||| | ||||| |||| || | | | | || |||||| ||| || |||| Sbjct 727977 AGGAGTTCTTGACCGACGCCCTTCCCTGCGCCCTTCTGGGTATGAACGCCAACCTGATGT 727918 Query 125725 GCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGC---AAGA 125781 || ||||||| ||||| ||||| || ||||| || | | | ||| | ||| Sbjct 727917 GCCAGTACATCGAGTTCGTGGCTGACCGTCTCTTG---GTGGCCCTCGGCAACTCGAAGT 727861 Query 125782 TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCA 125841 | |||||||| || ||||| || |||||| || || || | || ||||||| Sbjct 727860 ACTTCAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCCCTGGCTGGAAAGACCA 727801 Query 125842 ACTTTTTCGAGAAG 125855 |||| ||||||||| Sbjct 727800 ACTTCTTCGAGAAG 727787 >seq221 Length=929178 Score = 87.8 bits (96), Expect = 3e-12 Identities = 169/248 (68%), Gaps = 6/248 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || |||||| | ||| ||||| |||| || |||||| |||| Sbjct 705284 CAGGGTGGCAACAAGCGTCCCGGCGCTTTCGCCATCTACCTGGAGCCCTGGCACTCGGAT 705343 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || | || | || || ||| || || || | ||||| | ||| Sbjct 705344 GTCTTCGAATTCTTGGATCTTCGTAAGAACCACGGTAAGGAGGAAGTGAGAGCCCGTGAC 705403 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA---CGACGGTGGC 97052 |||| ||||| |||||| || || ||||||||||||| ||| | | |||||| Sbjct 705404 CTGTTCTATGCTCTCTGGACTCCCGACCTGTTCATGAAGCGGGTCGAGGCCAACGGTG-- 705461 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| || | |||||| || | | || || || ||||| | || || ||| Sbjct 705462 -ACTGGACTCTGTTCTGCCCCAACGAGGCTCCTGGCCTTGCCGATGTTTACGGAGACGAG 705520 Query 97113 TTTGAGGC 97120 || || || Sbjct 705521 TTCGATGC 705528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741056986085640