Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq183 91.5 1e-13 >seq183 Length=3359036 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || || ||||||| | | ||||| || ||||| ||||| || ||| Sbjct 619097 TCCTCAAGCTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCCGGAGGGATACCCTCCTTG 619038 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || ||||||| | ||| ||||| | | ||||| || | ||||| Sbjct 619037 TCTTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCGACCTCCAATGTGATT 618978 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| || || || |||||||||||||| Sbjct 618977 GTCTTGCCAGTGAGCGTCTTGACAAAGATCTGCAT 618943 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||| ||| | ||||||||||| || | ||| |||||| || ||| | ||| ||| Sbjct 618695 ACCAGGTGGAGGGTAGATTCCTTCTGGATGTTGTAATCGGACAAGGTGCGGCCATCTTCC 618636 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | ||| || || | ||||| || | ||||| || ||||| ||||| || ||||| | Sbjct 618635 AACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGG 618576 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTTT 94976 || || | |||||| ||| ||||| || ||| || || || | || ||||| | Sbjct 618575 ATCTTCGACTTGACATTATCGATGGTGTC-GC-TGGATTCAACCTCGAGGGTAATGGTCT 618518 Query 94977 TTCCAGTAAGAGTTTTCAC 94995 |||||||||| || || || Sbjct 618517 TTCCAGTAAGGGTCTTGAC 618499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448289860730040