Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq183 178 2e-40 seq231 172 9e-39 >seq183 Length=3359036 Score = 178 bits (196), Expect = 2e-40 Identities = 198/262 (76%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| |||| Sbjct 3147740 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTA 3147682 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| || |||||||| || ||||||||| |||| | || |||| ||||||| Sbjct 3147681 TCCGTCGTCTTGCGCGTCGTGGCGGTGTCAAGCGTATCTCCGCCATGATCTACGAAGAGA 3147622 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | || | ||| |||||| || |||| |||| ||| || || ||| || | Sbjct 3147621 CCCGCGGGGTGCTCAAGTCATTCCTCGAGTCCGTCATCCGTGACGCCGTCACCTACACTG 3147562 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 | ||||| || |||||||| |||||||| |||| ||||||| || | || || || | Sbjct 3147561 AACACGCCAAGCGTAAGACCGTCACCTCGTTGGACGTCGTCTACGCCCTCAAGCGCCAGG 3147502 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 |||||| | || ||||| || Sbjct 3147501 GCCGTACCCTCTACGGTTTCGG 3147480 >seq231 Length=2817998 Score = 172 bits (190), Expect = 9e-39 Identities = 188/247 (76%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||| | | || || |||||||| || ||||||||||| ||||| Sbjct 1072194 GCCAAGCGTCACCGTAAGATTT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 1072252 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| || ||||||||||| ||||||||| |||||| || |||| || |||| Sbjct 1072253 CCGCCGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGAC 1072312 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| |||| | |||| ||||||| || || |||| |||||| || ||| || || Sbjct 1072313 CCGTGGTGTTCTCAAGACCTTCCTCGAGGGTGTCATCCGTGATGCCGTCACCTACACTGA 1072372 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| ||||| ||| | || | ||||| || |||| || || || Sbjct 1072373 GCACGCCAAGAGAAAGACCGTCACTTCCCTCGACGTTGTCTACGCTCTGAAGCGCCAGGG 1072432 Query 16672 CCGTAAG 16678 |||| || Sbjct 1072433 CCGTGAG 1072439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074981480627