Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015-
10-06] 239 sequences; 36,072,589 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq183 178 2e-40
seq231 172 9e-39
>seq183
Length=3359036
Score = 178 bits (196), Expect = 2e-40
Identities = 198/262 (76%), Gaps = 2/262 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| ||||
Sbjct 3147740 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTA 3147682
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||||||||| || |||||||| || ||||||||| |||| | || |||| |||||||
Sbjct 3147681 TCCGTCGTCTTGCGCGTCGTGGCGGTGTCAAGCGTATCTCCGCCATGATCTACGAAGAGA 3147622
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | || | ||| |||||| || |||| |||| ||| || || ||| || |
Sbjct 3147621 CCCGCGGGGTGCTCAAGTCATTCCTCGAGTCCGTCATCCGTGACGCCGTCACCTACACTG 3147562
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
| ||||| || |||||||| |||||||| |||| ||||||| || | || || || |
Sbjct 3147561 AACACGCCAAGCGTAAGACCGTCACCTCGTTGGACGTCGTCTACGCCCTCAAGCGCCAGG 3147502
Query 16671 GCCGTAAGATTTATGGTTTTGG 16692
|||||| | || ||||| ||
Sbjct 3147501 GCCGTACCCTCTACGGTTTCGG 3147480
>seq231
Length=2817998
Score = 172 bits (190), Expect = 9e-39
Identities = 188/247 (76%), Gaps = 2/247 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||| | | || || |||||||| || ||||||||||| |||||
Sbjct 1072194 GCCAAGCGTCACCGTAAGATTT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 1072252
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||| || ||||||||||| ||||||||| |||||| || |||| || ||||
Sbjct 1072253 CCGCCGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGAC 1072312
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| |||| | |||| ||||||| || || |||| |||||| || ||| || ||
Sbjct 1072313 CCGTGGTGTTCTCAAGACCTTCCTCGAGGGTGTCATCCGTGATGCCGTCACCTACACTGA 1072372
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| ||||| ||| | || | ||||| || |||| || || ||
Sbjct 1072373 GCACGCCAAGAGAAAGACCGTCACTTCCCTCGACGTTGTCTACGCTCTGAAGCGCCAGGG 1072432
Query 16672 CCGTAAG 16678
|||| ||
Sbjct 1072433 CCGTGAG 1072439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074981480627
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |