Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq221 163 4e-35 seq176 122 1e-22 >seq221 Length=929178 Score = 163 bits (180), Expect = 4e-35 Identities = 472/722 (65%), Gaps = 6/722 (1%) Strand=Plus/Minus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 |||||||||||||| |||||| | | | |||||| || | || || | || | | Sbjct 705525 TCGAACTCGTCTCCGTAAACATCGGCAAGGCCAGGAGCCTCGTTGGGGCAGAACAGAGTC 705466 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63256 || || |||| ||| || || ||||| || || || ||| |||| ||||| ||| || Sbjct 705465 CAGTCACCGTTGGCCTCGACCCGCTTCATGAACAGGTCGGGAGTCCAGAGAGC-ATAGAA 705407 Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316 || || | || ||| |||||| || || ||||| |||||| | ||| | | Sbjct 705406 CAGGTCACGGGCTCTCACTTCCTCCTTACCGTGGTTCTTACGAAGATCCAAGAATTCGAA 705347 Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63376 | ||| || ||||| || |||| ||| ||||| | | | || || || ||||| || || Sbjct 705346 GACATCCGAGTGCCAGGGCTCCAGGTAGATGGCGAAAGCGCCGGGACGCTTGTTGCCACC 705287 Query 63377 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63436 ||| || | || | || |||||||| | || | | ||| |||| |||||||| || Sbjct 705286 CTGGTCAACATACCGGGCAGTGTTATTGAACACACGAAGCATAGGAACGATACCGTTGGA 705227 Query 63437 TATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63496 ||| ||||| || || ||| ||| ||||||| || || ||||| Sbjct 705226 AGAACCGTTGGTTCCACCAATGTAGGATCCGGTGGCACGGATCCGGTGAACGTTCAGACC 705167 Query 63497 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTC 63556 || || || || | || || || | || || || | || ||||| ||||| || Sbjct 705166 GATACCACCAGCGGTCTTGGAAATCATGGCACAGGTCTTCAGGGTATCATAAATACCATC 705107 Query 63557 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63616 ||||| || || |||| | | || || || || | ||| | || || || Sbjct 705106 AATGCTGTCTTCCTTCATATCGACCAGGAAGCACGAAGCAAGCTGGGGCTGAGGGGTACC 705047 Query 63617 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63676 ||||| || | |||||| ||||| ||||| || | || | || | | | ||| || Sbjct 705046 GGCATTGAACAGGGTAGGGGAAGCATGCGTGAAGTACTTCTGGGACATCAAGTGGTAGGT 704987 Query 63677 CTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 63736 ||| ||||| || |||||| | ||||| || || || |||||||| | || ||| Sbjct 704986 CTCGATAGCCCGCTCAATATCCTCTCCGTGAATACCGACAGCCACACGCATCAGCAGGTG 704927 Query 63737 CTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 63796 |||||| | || | | ||| | | || |||||| || || | || || Sbjct 704926 CTGAGGACGCTCGGCAACCTTTCCATCCACCCGCAGCAAGTACGACCGCTCAAGGGTCTT 704867 Query 63797 AAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 63854 || || ||| ||||||| ||||| || || ||||| | |||| |||||||||| | | Sbjct 704866 GAAGCCGAAAAAGTTGTAGTTGAAA--TCCCGGTCGTACACAATAGCCGAGTTGAGCTCA 704809 Query 63855 TC 63856 || Sbjct 704808 TC 704807 >seq176 Length=1444596 Score = 122 bits (134), Expect = 1e-22 Identities = 115/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 ||| || ||||| || ||| ||||||||||| | | ||| || |||||||| || || Sbjct 728054 CAAGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAAATCAGCTCGTTGGAGAAAGT 728113 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 ||| || ||||| ||||||||||| || ||||| || ||||| ||||| ||||| || || Sbjct 728114 GAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAAATGGAGGCGAAAGATCCGGAGAA 728173 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGC 33446 |||||| || || || || || ||||| Sbjct 728174 GAAGATACCCTCAACGGCGGCGAAGGC 728200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945338945240