Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq183 122 7e-23 >seq183 Length=3359036 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | ||||| || || |||| | ||||| ||| | | | Sbjct 618715 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACGTTGGAAGTTGAATCTAGC 618774 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || |||||||| |||||||| ||||| ||||| || Sbjct 618775 GACACCATCGACAACGTGAAGAGCAAGATTCAAGATAAGGAGGGAATTCCCCCCGACCAG 618834 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || ||||| || ||| | || || ||||||| | |||||||||||| Sbjct 618835 CAGCGTCTCATTTTCGCCGGAAAGCAGCTCGAAGACGGCCGCACCCTGTCCGATTACAAC 618894 Query 22399 ATTCAAAAAGAATCCAC 22415 || || ||||| ||||| Sbjct 618895 ATCCAGAAAGAGTCCAC 618911 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| ||||| || || | | ||| ||| | ||| | |||| Sbjct 618210 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCGAGCGACACCATCGACAACGTCAAGTCC 618269 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || || || || || || || || || || ||||| Sbjct 618270 AAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTGATTTTCGCTGGCAAG 618329 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||||| || ||| ||||| | ||||| |||||||| ||||| ||||||||| | || Sbjct 618330 CAGTTGGAAGATGGTCGCACTCTGTCCGACTACAACATCCAAAAGGAATCCACCCTCCAC 618389 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | ||| |||| |||| || ||| Sbjct 618390 CTGGTTCTGCGCCTGCGTGGTGGT 618413 Score = 102 bits (112), Expect = 7e-17 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 22258 ACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAG 22317 || || || || ||| ||| ||| ||| | || || |||| || || || |||||| Sbjct 618526 ACCCTCGAGGTTGAATCCAGCGACACCATCGATAATGTCAAGTCGAAGATCCAGGACAAG 618585 Query 22318 GAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCAC 22377 |||||||| || ||||| || || ||| | || || || || || ||||| || ||| | Sbjct 618586 GAGGGTATCCCTCCCGACCAGCAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAAGATGGC 618645 Query 22378 CGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 |||||| | |||||||||||||| || || ||||| ||| Sbjct 618646 CGCACCTTGTCCGATTACAACATCCAGAAGGAATCTACC 618684 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| | || || || | | | Sbjct 618943 ATGCAGATCTTTGTCAAGACGCTCACTGGCAAGACAATCACATTGGAGGTCGAGAGCTCG 619002 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || |||||||||||||||||||| || || || || Sbjct 619003 GACACGATCGACAACGTCAAGAGCAAGATTCAAGACAAGGAGGGTATCCCTCCGGACCAG 619062 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| ||| | ||||| ||||| |||| || |||||| Sbjct 619063 CAGCGTCTGATCTTTGCAGGCAAGCAGCTTGAGGACGGGCGCACGCTCTCTGACTACAAC 619122 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 619123 ATTCAGAAGGA 619133 Score = 82.4 bits (90), Expect = 6e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || ||||| || | || || || || || | | ||| ||| | Sbjct 1362091 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCAT 1362032 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| | |||| || || || ||||||||||| || || ||||| || || ||||| Sbjct 1362031 CGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGTCT 1361972 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 ||| || || || || ||| | |||||| ||||||| | ||| |||||||| || || Sbjct 1361971 TATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 1361912 Query 22407 AGAATCCA 22414 | || || Sbjct 1361911 GGTATGCA 1361904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726777411035