Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20westerdijkiae_20[genbank_20GCA_5F001307345.1_202015- 10-06] 239 sequences; 36,072,589 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq176 125 1e-23 seq188 93.3 9e-14 seq191 91.5 3e-13 >seq176 Length=1444596 Score = 125 bits (138), Expect = 1e-23 Identities = 299/442 (68%), Gaps = 14/442 (3%) Strand=Plus/Plus Query 251526 CATCACACCTGGACGT-TGATATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCT 251584 ||||||||| || | | || || ||| ||||| |||||||| || | ||| || Sbjct 727754 CATCACACC-GGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCAG 727812 Query 251585 CCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGC 251644 |||| ||||| ||||||||||||||||||||| ||||| ||| | | ||| | | || Sbjct 727813 CCAGGGAGATCGACTCCATGAAGTCGAAGGGGTTGGTGGCGTTGAAGTACTTCGAGTTGC 727872 Query 251645 CAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGT 251704 | || || || |||| ||||| ||||| ||||| | ||||| | |||||| | | || Sbjct 727873 CGAGGGCCACCAAGAGACGGTCAGCCACGAACTCGATGTACTGGCACATCAGGTTGGCGT 727932 Query 251705 TCATGCCAATCATACGACAAGGAATTGCCTCACAGATGAATTCCTTTTCGTTGGCAACTG 251764 |||| || | | || |||| || || | ||| ||||| || | || || | Sbjct 727933 TCATACCCAGAAGGGCGCAGGGAAGGGCGTCGGTCAAGAACTCCTTCTCAATAGCGACAG 727992 Query 251765 CCTCCTCCACAATTGCCTTC---ACCTG-TGCCAGAGACAGCTTGTTCTCCAGCTTTGAG 251820 |||| | | || ||| | ||||| | | | | | | ||||| || | ||| Sbjct 727993 CCTCGACAATGATGTCCTCCACAACCTGCTTGCTGGGGC-GGTTGTT---GAGGTGAGAG 728048 Query 251821 TACAG-GAGCTCGCCAA-ACTGTTGGTGCAGACCCTCGTCGCGACTGATGAACTCGTTGG 251878 | || ||| || || | || ||| ||||||||||| ||| || | |||||||| Sbjct 728049 AAGAGCAAGCAGGCGAAGTCAGT--GTGGAGACCCTCGTCACGAGAAATCAGCTCGTTGG 728106 Query 251879 ACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAAGATTGCGCAAAAGGATC 251938 | | | || |||||||||| ||||| ||| | |||||||| || | | || |||| Sbjct 728107 AGAAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAAATGGAGGCGAAAGATC 728166 Query 251939 CAGAGAACAGCAGACCCTCGAC 251960 | ||||| | | |||||| || Sbjct 728167 CGGAGAAGAAGATACCCTCAAC 728188 >seq188 Length=2604827 Score = 93.3 bits (102), Expect = 9e-14 Identities = 140/198 (71%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219 ||| || || | ||||| || ||||| ||||| ||||| ||||| || |||| || || Sbjct 436159 CTCCCGTATCGCCGTCATCGGTCCCAACGGTGCCGGTAAATCTACTCTGGTCAACGTTCT 436218 Query 280220 GACTGGCGA---GACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGAT 280276 ||| || || || || |||| |||| || | |||| ||||| || || Sbjct 436219 GACCGGTGAATTGATCC---CCACCAAGGGTGAAGTCTACCAGCACGAGAACATCCGTAT 436275 Query 280277 GGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAA 280336 || ||| || |||||||||||| ||||||||| |||||||| |||| ||||| Sbjct 436276 TGCCTACATCAAGCAGCACGCTTTCGCCCACATCGATAACCACCTCGACAGCACTCCCTC 436335 Query 280337 CCAATACATTCAGTGGCG 280354 | | ||||| |||||||| Sbjct 436336 CGAGTACATCCAGTGGCG 436353 >seq191 Length=1646026 Score = 91.5 bits (100), Expect = 3e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 279692 GCCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCT 279751 ||| || || |||||||| ||||||||||||||||||||||| || | |||||||| | Sbjct 24517 GCCCGTTGGATCTCTGTCTGGTGGTTGGAAGATGAAGCTGGCGCTGGCCCGCGCCATGTT 24458 Query 279752 ACTGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGT 279811 || ||||| ||||| ||||| || || || || ||||| |||| | ||||||| Sbjct 24457 GATGAAGGCCGACGTCCTCCTGCTGGACGAACCTACTAACCATTTGGATGTCGCCAACGT 24398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027833652570999